AutismKB 2.0

Annotation Detail for RPS24


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Basic Information Top
Gene Symbol:RPS24 ( DBA3,DKFZp686N1586 )
Gene Full Name: ribosomal protein S24
Band: 10q22.3
Quick LinksEntrez ID:6229; OMIM: 602412; Uniprot ID:RS24_HUMAN; ENSEMBL ID: ENSG00000138326; HGNC ID: 10411
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body46 / 70761650
blastocyst32 / 62319513
fetus249 / 564012441
neonate42 / 310971350
infant6 / 23620254
juvenile12 / 55556215
adult1002 / 1939121516
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor11 / 12794859
bladder carcinoma4 / 17475228
breast (mammary gland) tumor60 / 94178637
cervical tumor12 / 34366349
chondrosarcoma27 / 82823325
colorectal tumor68 / 114246595
esophageal tumor2 / 17290115
gastrointestinal tumor44 / 119369368
germ cell tumor57 / 263845216
glioma40 / 106883374
head and neck tumor54 / 136302396
kidney tumor24 / 68959348
leukemia34 / 95842354
liver tumor73 / 96359757
lung tumor52 / 103127504
lymphoma38 / 71755529
non-neoplasia6 / 9725061
normal1211 / 3360307360
ovarian tumor32 / 76682417
pancreatic tumor81 / 104616774
primitive neuroectodermal tumor of the CNS77 / 125680612
prostate cancer321 / 1026803126
retinoblastoma24 / 46356517
skin tumor52 / 124949416
soft tissue/muscle tissue tumor68 / 125191543
uterine tumor32 / 90257354
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue5 / 13106381
adrenal gland30 / 33197903
ascites24 / 40015599
bladder7 / 29757235
blood33 / 123478267
bone66 / 71655921
bone marrow77 / 488011577
brain223 / 1100989202
cervix14 / 48171290
connective tissue26 / 149255174
ear15 / 16212925
embryonic tissue176 / 215722815
esophagus2 / 2020998
eye88 / 211054416
heart63 / 89626702
intestine116 / 234472494
kidney55 / 211777259
larynx7 / 24145289
liver117 / 207743563
lung111 / 336974329
lymph27 / 44270609
lymph node13 / 91610141
mammary gland70 / 153271456
mouth26 / 67052387
muscle90 / 107715835
nerve1 / 1576863
ovary43 / 102051421
pancreas125 / 214812581
parathyroid4 / 20539194
pharynx9 / 41328217
pituitary gland25 / 165851507
placenta55 / 280825195
prostate391 / 1893452065
salivary gland14 / 20155694
skin82 / 210574389
spleen26 / 53952481
stomach32 / 96619331
testis41 / 330442124
thymus27 / 81131332
thyroid19 / 47473400
tonsil20 / 169991176
trachea13 / 52413248
umbilical cord42 / 136803070
uterus86 / 232878369
vascular21 / 51780405
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 200061_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts13697
Adipocyte7458.95
AdrenalCortex5969.25
Adrenalgland2116.5
Amygdala4591.9
Appendix5121.45
AtrioventricularNode1750.35
BDCA4+_DentriticCells12202.5
Bonemarrow2885
BronchialEpithelialCells12821.45
CD105+_Endothelial11190.15
CD14+_Monocytes13805.15
CD19+_BCells(neg._sel.)12447.25
CD33+_Myeloid13941.6
CD34+17112.65
CD4+_Tcells13169.95
CD56+_NKCells12223
CD71+_EarlyErythroid8425.35
CD8+_Tcells10994.65
CardiacMyocytes7977.65
Caudatenucleus2083.65
Cerebellum1115.75
CerebellumPeduncles2350.9
CiliaryGanglion1669.75
CingulateCortex2771.3
Colorectaladenocarcinoma3836.45
DorsalRootGanglion1993.45
FetalThyroid7979.65
Fetalbrain9137
Fetalliver3847
Fetallung8143.1
GlobusPallidus1678.25
Heart453.4
Hypothalamus5488.95
Kidney1237
Leukemia_chronicMyelogenousK-56211558.3
Leukemia_promyelocytic-HL-6012038.85
Leukemialymphoblastic(MOLT-4)11440.4
Liver711.75
Lung2084.65
Lymphnode7636.15
Lymphoma_burkitts(Daudi)15988.2
Lymphoma_burkitts(Raji)12221.3
MedullaOblongata2207.4
OccipitalLobe3053.45
OlfactoryBulb5074.1
Ovary7939.1
Pancreas7933.55
PancreaticIslet10679.25
ParietalLobe2231.85
Pituitary9020.6
Placenta2811.9
Pons1847.35
PrefrontalCortex6387.85
Prostate6582.6
Salivarygland6367.3
SkeletalMuscle2784.35
Skin4238.4
SmoothMuscle11082.3
Spinalcord5440.5
SubthalamicNucleus2293.8
SuperiorCervicalGanglion1175.75
TemporalLobe2981.25
Testis1166.4
TestisGermCell6321.2
TestisIntersitial4440.6
TestisLeydigCell3556.95
TestisSeminiferousTubule3598.1
Thalamus3076.3
Thymus3761.15
Thyroid9814.95
Tongue6229.6
Tonsil9384.4
Trachea4943.45
TrigeminalGanglion1605.5
Uterus8960.55
UterusCorpus8546.55
WholeBlood11419
Wholebrain2394.8
colon5763.4
pineal_day8856.22
pineal_night7599.04
retina4345.5
small_intestine3633.25
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P1206
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala13.92 ± 0.24
Basal Forebrain13.79 ± 0.21
Basal Part of Pons13.61 ± 0.24
Cerebellar Cortex13.65 ± 0.16
Cerebellar Nuclei13.67 ± 0.23
Claustrum13.88 ± 0.51
Epithalamus13.45 ± 0.35
Frontal Lobe13.56 ± 0.26
Globus Pallidus14.29 ± 0.17
Hypothalamus13.88 ± 0.23
Insula13.69 ± 0.2
Limbic Lobe13.56 ± 0.27
Mesencephalon13.72 ± 0.29
Myelencephalon13.59 ± 0.28
Occipital Lobe13.45 ± 0.2
Parietal Lobe13.6 ± 0.26
Pontine Tegmentum13.66 ± 0.24
Striatum13.62 ± 0.2
Subthalamus13.73 ± 0.2
Temporal Lobe13.66 ± 0.25
Thalamus13.53 ± 0.21
White Matter14.39 ± 0.35
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rps24CBCerebellum27.59
34.56
Rps24CTXCerebral cortex61.41
57.02
Rps24HIPHippocampal region78.29
100
Rps24HPFHippocampal formation90.2
100
Rps24HYHypothalamus100
100
Rps24LSXLateral septal complex29.21
30.63
Rps24MBMidbrain86.01
99.74
Rps24MYMedulla66.13
100
Rps24OLFOlfactory bulb55
57.94
Rps24PPons79
100
Rps24PALPallidum79.14
100
Rps24RHPRetrohippocampal region100
100
Rps24sAMYStriatum-like amygdalar nuclei100
100
Rps24STRStriatum38.78
39.06
Rps24STRdStriatum dorsal region23.64
24.75
Rps24STRvStriatum ventral region49.06
41.45
Rps24THThalamus66.73
74.71
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00038411 15 69 83 TTGFGMIYDSLDYAK Peptide Atlas
RS24_HUMAN_1 8 1 8 MNDTVTIR PRIDE
RS24_HUMAN_20 12 20 31 KQMVIDVLHPGK PRIDE
RS24_HUMAN_20 17 20 36 KQMVIDVLHPGKATVPK PRIDE
RS24_HUMAN_21 11 21 31 QMVIDVLHPGK PRIDE
RS24_HUMAN_22 11 22 32 QMVIDVLHPGK PRIDE
RS24_HUMAN_49 12 49 60 TTPDVIFVFGFR PRIDE
RS24_HUMAN_68 15 68 82 TTGFGMIYDSLDYAK PRIDE
RS24_HUMAN_68 16 68 83 TTGFGMIYDSLDYAKK PRIDE
RS24_HUMAN_69 15 69 83 TTGFGMIYDSLDYAK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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