AutismKB 2.0

Annotation Detail for S100A10


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:S100A10 ( 42C,ANX2L,ANX2LG,CAL1L,CLP11,Ca[1],GP11,MGC111133,P11,p10 )
Gene Full Name: S100 calcium binding protein A10
Band: 1q21.3
Quick LinksEntrez ID:6281; OMIM: 114085; Uniprot ID:S10AA_HUMAN; ENSEMBL ID: ENSG00000197747; HGNC ID: 10487
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body20 / 70761282
blastocyst6 / 6231996
fetus85 / 564012150
neonate3 / 3109796
infant0 / 236200 
juvenile1 / 5555617
adult253 / 1939121130
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma1 / 1747557
breast (mammary gland) tumor45 / 94178477
cervical tumor5 / 34366145
chondrosarcoma4 / 8282348
colorectal tumor28 / 114246245
esophageal tumor3 / 17290173
gastrointestinal tumor20 / 119369167
germ cell tumor20 / 26384575
glioma17 / 106883159
head and neck tumor12 / 13630288
kidney tumor4 / 6895958
leukemia1 / 9584210
liver tumor15 / 96359155
lung tumor27 / 103127261
lymphoma1 / 7175513
non-neoplasia2 / 9725020
normal325 / 336030796
ovarian tumor9 / 76682117
pancreatic tumor23 / 104616219
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer9 / 10268087
retinoblastoma0 / 463560 
skin tumor11 / 12494988
soft tissue/muscle tissue tumor36 / 125191287
uterine tumor11 / 90257121
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland4 / 33197120
ascites7 / 40015174
bladder1 / 2975733
blood2 / 12347816
bone12 / 71655167
bone marrow2 / 4880140
brain36 / 110098932
cervix8 / 48171166
connective tissue6 / 14925540
ear5 / 16212308
embryonic tissue26 / 215722120
esophagus3 / 20209148
eye10 / 21105447
heart31 / 89626345
intestine57 / 234472243
kidney11 / 21177751
larynx4 / 24145165
liver41 / 207743197
lung61 / 336974181
lymph1 / 4427022
lymph node11 / 91610120
mammary gland62 / 153271404
mouth2 / 6705229
muscle9 / 10771583
nerve1 / 1576863
ovary10 / 10205197
pancreas26 / 214812121
parathyroid0 / 205390 
pharynx7 / 41328169
pituitary gland2 / 16585120
placenta19 / 28082567
prostate15 / 18934579
salivary gland0 / 201550 
skin27 / 210574128
spleen2 / 5395237
stomach8 / 9661982
testis14 / 33044242
thymus0 / 811310 
thyroid1 / 4747321
tonsil3 / 16999176
trachea0 / 524130 
umbilical cord3 / 13680219
uterus48 / 232878206
vascular13 / 51780251
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 200872_at
Cell line Expression level Expression bar
721_B_lymphoblasts88.25
Adipocyte4716.6
AdrenalCortex1026
Adrenalgland2326.7
Amygdala465.75
Appendix2324.4
AtrioventricularNode1536.7
BDCA4+_DentriticCells3601.65
Bonemarrow836.55
BronchialEpithelialCells16889.15
CD105+_Endothelial342.6
CD14+_Monocytes8840
CD19+_BCells(neg._sel.)1841.45
CD33+_Myeloid8587.05
CD34+718.25
CD4+_Tcells2104
CD56+_NKCells3018.2
CD71+_EarlyErythroid227.8
CD8+_Tcells1528.6
CardiacMyocytes8433.75
Caudatenucleus796.25
Cerebellum307
CerebellumPeduncles361.65
CiliaryGanglion4220.35
CingulateCortex187.35
Colorectaladenocarcinoma7194.2
DorsalRootGanglion5346.75
FetalThyroid1948.85
Fetalbrain309.9
Fetalliver1004.6
Fetallung5521.65
GlobusPallidus299.3
Heart2584.9
Hypothalamus982.4
Kidney1546.8
Leukemia_chronicMyelogenousK-562175.75
Leukemia_promyelocytic-HL-60824.1
Leukemialymphoblastic(MOLT-4)940.45
Liver1569.25
Lung15237.05
Lymphnode1520.05
Lymphoma_burkitts(Daudi)235.65
Lymphoma_burkitts(Raji)265.2
MedullaOblongata311.45
OccipitalLobe136.35
OlfactoryBulb3905.75
Ovary1081.55
Pancreas3401.85
PancreaticIslet1327.1
ParietalLobe347.95
Pituitary618
Placenta2796.3
Pons617.5
PrefrontalCortex538
Prostate4078.5
Salivarygland828.55
SkeletalMuscle611.45
Skin2086.7
SmoothMuscle5086.75
Spinalcord3079.2
SubthalamicNucleus328.55
SuperiorCervicalGanglion3109.9
TemporalLobe418.8
Testis2271.2
TestisGermCell3120.05
TestisIntersitial2384
TestisLeydigCell1681.45
TestisSeminiferousTubule1803.4
Thalamus410.35
Thymus1668.3
Thyroid1363.8
Tongue4913.05
Tonsil2146.5
Trachea1624.15
TrigeminalGanglion3996
Uterus1938.45
UterusCorpus891.3
WholeBlood4756.9
Wholebrain254.55
colon5682.2
pineal_day518.72
pineal_night582.86
retina3232.3
small_intestine2697.15
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P121234
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.86 ± 1.05
Basal Forebrain2.57 ± 0.29
Basal Part of Pons2.25 ± 0.43
Cerebellar Cortex2.2 ± 0.55
Cerebellar Nuclei2.84 ± 0.8
Claustrum3.36 ± 0.82
Epithalamus2.65 ± 0.6
Frontal Lobe2.29 ± 0.69
Globus Pallidus3.14 ± 0.82
Hypothalamus2.55 ± 0.69
Insula2.57 ± 0.59
Limbic Lobe2.46 ± 0.58
Mesencephalon2.63 ± 0.79
Myelencephalon2.52 ± 0.67
Occipital Lobe2.5 ± 0.75
Parietal Lobe2.4 ± 0.67
Pontine Tegmentum2.54 ± 0.67
Striatum2.97 ± 0.78
Subthalamus2.63 ± 0.77
Temporal Lobe2.33 ± 0.7
Thalamus2.41 ± 0.65
White Matter2.78 ± 0.24
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
S100a10CBCerebellum9.94
15.97
S100a10CTXCerebral cortex21.92
20.54
S100a10HIPHippocampal region5.63
6.69
S100a10HPFHippocampal formation8.84
10.89
S100a10HYHypothalamus6.83
8.06
S100a10LSXLateral septal complex14.29
14.56
S100a10MBMidbrain6.82
9.26
S100a10MYMedulla15.03
28.85
S100a10OLFOlfactory bulb21.68
23.34
S100a10PPons9.24
16.85
S100a10PALPallidum7.63
12.63
S100a10RHPRetrohippocampal region12.69
14.68
S100a10sAMYStriatum-like amygdalar nuclei7.81
8.68
S100a10STRStriatum6.39
6.87
S100a10STRdStriatum dorsal region6.16
6.46
S100a10STRvStriatum ventral region3.68
4.78
S100a10THThalamus3.7
3.83
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00040046 17 38 54 EFPGFLENQKDPLAVDK Peptide Atlas
S10AA_HUMAN_0 0 0 0 FAGDKGYLTK PRIDE
S10AA_HUMAN_1 17 1 17 PSQMEHAMETMMFTFHK PRIDE
S10AA_HUMAN_18 10 18 27 FAGDKGYLTK PRIDE
S10AA_HUMAN_18 14 18 31 FAGDKGYLTKEDLR PRIDE
S10AA_HUMAN_23 9 23 31 GYLTKEDLR PRIDE
S10AA_HUMAN_32 15 32 46 VLMEKEFPGFLENQK PRIDE
S10AA_HUMAN_32 22 32 53 VLMEKEFPGFLENQKDPLAVDK PRIDE
S10AA_HUMAN_37 10 37 46 EFPGFLENQK PRIDE
S10AA_HUMAN_37 17 37 53 EFPGFLENQKDPLAVDK PRIDE
S10AA_HUMAN_37 20 37 56 EFPGFLENQKDPLAVDKIMK PRIDE
S10AA_HUMAN_47 10 47 56 DPLAVDKIMK PRIDE
S10AA_HUMAN_54 12 54 65 IMKDLDQCRDGK PRIDE
S10AA_HUMAN_54 9 54 62 IMKDLDQCR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved