AutismKB 2.0

Annotation Detail for SAT1


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Basic Information Top
Gene Symbol:SAT1 ( DC21,KFSD,KFSDX,SAT,SSAT,SSAT-1 )
Gene Full Name: spermidine/spermine N1-acetyltransferase 1
Band: Xp22.11
Quick LinksEntrez ID:6303; OMIM: 313020; Uniprot ID:SAT1_HUMAN; ENSEMBL ID: ENSG00000130066; HGNC ID: 10540
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst1 / 6231916
fetus78 / 564012138
neonate10 / 31097321
infant3 / 23620127
juvenile2 / 5555635
adult604 / 1939121311
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor5 / 12794390
bladder carcinoma2 / 17475114
breast (mammary gland) tumor16 / 94178169
cervical tumor4 / 34366116
chondrosarcoma23 / 82823277
colorectal tumor32 / 114246280
esophageal tumor7 / 17290404
gastrointestinal tumor50 / 119369418
germ cell tumor9 / 26384534
glioma23 / 106883215
head and neck tumor32 / 136302234
kidney tumor18 / 68959261
leukemia13 / 95842135
liver tumor35 / 96359363
lung tumor12 / 103127116
lymphoma7 / 7175597
non-neoplasia22 / 97250226
normal1218 / 3360307362
ovarian tumor11 / 76682143
pancreatic tumor20 / 104616191
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer34 / 102680331
retinoblastoma2 / 4635643
skin tumor34 / 124949272
soft tissue/muscle tissue tumor7 / 12519155
uterine tumor95 / 902571052
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue8 / 13106610
adrenal gland13 / 33197391
ascites9 / 40015224
bladder14 / 29757470
blood166 / 1234781344
bone12 / 71655167
bone marrow22 / 48801450
brain125 / 1100989113
cervix4 / 4817183
connective tissue13 / 14925587
ear19 / 162121171
embryonic tissue9 / 21572241
esophagus7 / 20209346
eye47 / 211054222
heart22 / 89626245
intestine71 / 234472302
kidney54 / 211777254
larynx2 / 2414582
liver95 / 207743457
lung211 / 336974626
lymph0 / 442700 
lymph node15 / 91610163
mammary gland72 / 153271469
mouth8 / 67052119
muscle8 / 10771574
nerve4 / 15768253
ovary33 / 102051323
pancreas49 / 214812228
parathyroid2 / 2053997
pharynx58 / 413281403
pituitary gland4 / 16585241
placenta133 / 280825473
prostate75 / 189345396
salivary gland15 / 20155744
skin62 / 210574294
spleen48 / 53952889
stomach45 / 96619465
testis26 / 33044278
thymus15 / 81131184
thyroid22 / 47473463
tonsil0 / 169990 
trachea11 / 52413209
umbilical cord0 / 136800 
uterus127 / 232878545
vascular11 / 51780212
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 210592_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts922.4
Adipocyte4269.6
AdrenalCortex1351.6
Adrenalgland691.7
Amygdala582.35
Appendix789.25
AtrioventricularNode377.45
BDCA4+_DentriticCells2394.8
Bonemarrow2782.6
BronchialEpithelialCells5694.6
CD105+_Endothelial840.65
CD14+_Monocytes4730.95
CD19+_BCells(neg._sel.)1478.7
CD33+_Myeloid4984.3
CD34+565.25
CD4+_Tcells724.45
CD56+_NKCells3127
CD71+_EarlyErythroid388.95
CD8+_Tcells628.1
CardiacMyocytes735.15
Caudatenucleus445.5
Cerebellum72.1
CerebellumPeduncles76.3
CiliaryGanglion1000.55
CingulateCortex369.8
Colorectaladenocarcinoma1222.05
DorsalRootGanglion455.85
FetalThyroid2187.55
Fetalbrain644.1
Fetalliver658.6
Fetallung5698.15
GlobusPallidus134.45
Heart121.65
Hypothalamus1208.7
Kidney1748.5
Leukemia_chronicMyelogenousK-562157.25
Leukemia_promyelocytic-HL-60721.1
Leukemialymphoblastic(MOLT-4)107.75
Liver917.95
Lung2891.65
Lymphnode2167.7
Lymphoma_burkitts(Daudi)805.25
Lymphoma_burkitts(Raji)1373.25
MedullaOblongata334.3
OccipitalLobe547.85
OlfactoryBulb2451.2
Ovary708.65
Pancreas1207
PancreaticIslet4022
ParietalLobe299.15
Pituitary2514.05
Placenta5536.45
Pons451.45
PrefrontalCortex725.5
Prostate1806.9
Salivarygland2112.45
SkeletalMuscle36.95
Skin737.15
SmoothMuscle808.55
Spinalcord1332.4
SubthalamicNucleus347.2
SuperiorCervicalGanglion328.1
TemporalLobe305.6
Testis700.05
TestisGermCell1215.85
TestisIntersitial324.2
TestisLeydigCell375.8
TestisSeminiferousTubule455.15
Thalamus604.75
Thymus886.1
Thyroid5100.4
Tongue447.15
Tonsil1796.5
Trachea2327.25
TrigeminalGanglion512.75
Uterus875.45
UterusCorpus2373.55
WholeBlood3448.1
Wholebrain434.3
colon1956.55
pineal_day716.8
pineal_night645.1
retina1857.675
small_intestine1880.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P137016
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.57 ± 0.31
Basal Forebrain10.45 ± 0.11
Basal Part of Pons10.47 ± 0.38
Cerebellar Cortex10.11 ± 0.21
Cerebellar Nuclei10.81 ± 0.17
Claustrum10.1 ± 0.53
Epithalamus10.77 ± 0.36
Frontal Lobe10.61 ± 0.33
Globus Pallidus11.05 ± 0.13
Hypothalamus10.71 ± 0.49
Insula10.69 ± 0.28
Limbic Lobe10.42 ± 0.46
Mesencephalon10.56 ± 0.37
Myelencephalon10.58 ± 0.41
Occipital Lobe10.27 ± 0.32
Parietal Lobe10.56 ± 0.4
Pontine Tegmentum10.63 ± 0.38
Striatum11.46 ± 0.32
Subthalamus10.87 ± 0.05
Temporal Lobe10.59 ± 0.3
Thalamus10.53 ± 0.32
White Matter10.31 ± 0.32
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Sat1CBCerebellum27.61
92.91
Sat1CTXCerebral cortex56.09
41.3
Sat1HIPHippocampal region35.48
34.73
Sat1HPFHippocampal formation36.18
31.4
Sat1HYHypothalamus48
37.03
Sat1LSXLateral septal complex28.86
19.43
Sat1MBMidbrain43.08
39.9
Sat1MYMedulla54.24
57.59
Sat1OLFOlfactory bulb48.78
37.62
Sat1PPons60.12
59.94
Sat1PALPallidum47.5
42.43
Sat1RHPRetrohippocampal region36.52
26.28
Sat1sAMYStriatum-like amygdalar nuclei42.33
31.42
Sat1STRStriatum34.51
24.88
Sat1STRdStriatum dorsal region30.85
22.86
Sat1STRvStriatum ventral region43.43
28.25
Sat1THThalamus72.12
64.21
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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