AutismKB 2.0

Annotation Detail for BCORL1


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Basic Information Top
Gene Symbol:BCORL1 ( BCoR-L1,CXorf10,FLJ11362,FLJ11632 )
Gene Full Name: BCL6 corepressor-like 1
Band: Xq26.1
Quick LinksEntrez ID:63035; OMIM: 300688; Uniprot ID:BCORL_HUMAN; ENSEMBL ID: ENSG00000085185; HGNC ID: 25657
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst1 / 6231916
fetus10 / 56401217
neonate2 / 3109764
infant0 / 236200 
juvenile1 / 5555617
adult49 / 193912125
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor3 / 26384511
glioma0 / 1068830 
head and neck tumor4 / 13630229
kidney tumor1 / 6895914
leukemia7 / 9584273
liver tumor0 / 963590 
lung tumor2 / 10312719
lymphoma1 / 7175513
non-neoplasia2 / 9725020
normal64 / 336030719
ovarian tumor3 / 7668239
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood3 / 12347824
bone1 / 7165513
bone marrow0 / 488010 
brain8 / 11009897
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue7 / 21572232
esophagus0 / 202090 
eye3 / 21105414
heart4 / 8962644
intestine4 / 23447217
kidney1 / 2117774
larynx1 / 2414541
liver0 / 2077430 
lung8 / 33697423
lymph1 / 4427022
lymph node5 / 9161054
mammary gland0 / 1532710 
mouth1 / 6705214
muscle0 / 1077150 
nerve1 / 1576863
ovary3 / 10205129
pancreas5 / 21481223
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta25 / 28082589
prostate1 / 1893455
salivary gland0 / 201550 
skin2 / 2105749
spleen1 / 5395218
stomach0 / 966190 
testis4 / 33044212
thymus0 / 811310 
thyroid3 / 4747363
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord2 / 13680146
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219444_at
Cell line Expression level Expression bar
721_B_lymphoblasts12.75
Adipocyte12.15
AdrenalCortex17.9
Adrenalgland22.75
Amygdala12.75
Appendix21.1
AtrioventricularNode14.1
BDCA4+_DentriticCells13.7
Bonemarrow20.7
BronchialEpithelialCells14.15
CD105+_Endothelial15.8
CD14+_Monocytes14.8
CD19+_BCells(neg._sel.)13.75
CD33+_Myeloid23.25
CD34+19.7
CD4+_Tcells15.15
CD56+_NKCells23.15
CD71+_EarlyErythroid13.55
CD8+_Tcells12.95
CardiacMyocytes19.15
Caudatenucleus11.1
Cerebellum13.4
CerebellumPeduncles16.8
CiliaryGanglion10.6
CingulateCortex19.95
Colorectaladenocarcinoma23.55
DorsalRootGanglion12
FetalThyroid19.6
Fetalbrain20.4
Fetalliver12.65
Fetallung14.15
GlobusPallidus9.55
Heart20.5
Hypothalamus15.7
Kidney14.85
Leukemia_chronicMyelogenousK-56213.8
Leukemia_promyelocytic-HL-6012.35
Leukemialymphoblastic(MOLT-4)15.75
Liver22.8
Lung19.95
Lymphnode14.35
Lymphoma_burkitts(Daudi)19.4
Lymphoma_burkitts(Raji)21.2
MedullaOblongata13.75
OccipitalLobe12.85
OlfactoryBulb11.6
Ovary14
Pancreas12.8
PancreaticIslet17
ParietalLobe15.5
Pituitary18.75
Placenta17.7
Pons13.85
PrefrontalCortex18.15
Prostate18.4
Salivarygland11.35
SkeletalMuscle21.35
Skin12.6
SmoothMuscle10.55
Spinalcord15.15
SubthalamicNucleus11.95
SuperiorCervicalGanglion27.6
TemporalLobe14.5
Testis22.65
TestisGermCell13.8
TestisIntersitial18.95
TestisLeydigCell14.45
TestisSeminiferousTubule20.4
Thalamus13.6
Thymus12.25
Thyroid24.6
Tongue14.5
Tonsil14.9
Trachea16.75
TrigeminalGanglion17.6
Uterus18.4
UterusCorpus16.15
WholeBlood16.7
Wholebrain9.3
colon13.55
pineal_day15.7
pineal_night14.36
retina17.325
small_intestine13.1
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6495_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.12 ± 0.73
Basal Forebrain4.08 ± 0.46
Basal Part of Pons3.8 ± 0.42
Cerebellar Cortex3.71 ± 0.63
Cerebellar Nuclei3.87 ± 0.49
Claustrum4.22 ± 0.89
Epithalamus3.4 ± 0.62
Frontal Lobe3.89 ± 0.66
Globus Pallidus3.89 ± 0.5
Hypothalamus3.56 ± 0.66
Insula3.59 ± 0.86
Limbic Lobe3.97 ± 0.64
Mesencephalon3.8 ± 0.69
Myelencephalon3.9 ± 0.66
Occipital Lobe4.02 ± 0.59
Parietal Lobe3.75 ± 0.68
Pontine Tegmentum3.78 ± 0.61
Striatum3.98 ± 0.67
Subthalamus3.37 ± 0.44
Temporal Lobe3.83 ± 0.76
Thalamus3.83 ± 0.71
White Matter3.27 ± 0.19
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Bcorl1CBCerebellum6.1
6.2
Bcorl1CTXCerebral cortex21.3
16.36
Bcorl1HIPHippocampal region17.68
19.91
Bcorl1HPFHippocampal formation15.29
15.26
Bcorl1HYHypothalamus3.67
2.7
Bcorl1LSXLateral septal complex10.97
7.94
Bcorl1MBMidbrain2.72
2.69
Bcorl1MYMedulla10.49
12.66
Bcorl1OLFOlfactory bulb23.03
19.59
Bcorl1PPons5.26
5.83
Bcorl1PALPallidum5.18
4.47
Bcorl1RHPRetrohippocampal region10.8
8.36
Bcorl1sAMYStriatum-like amygdalar nuclei9.15
6.88
Bcorl1STRStriatum10.04
7.41
Bcorl1STRdStriatum dorsal region9.86
7.58
Bcorl1STRvStriatum ventral region10.75
6.92
Bcorl1THThalamus8.11
6.34
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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