Annotation Detail for NAPB
Basic Information Top
| Gene Symbol: | NAPB ( MGC26066,MGC48335,SNAP-BETA,SNAPB ) |
|---|---|
| Gene Full Name: | N-ethylmaleimide-sensitive factor attachment protein, beta |
| Band: | 20p11.21 |
| Quick Links | Entrez ID:63908; OMIM: 611270; Uniprot ID:SNAB_HUMAN; ENSEMBL ID: ENSG00000125814; HGNC ID: 15751 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.269471
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 53 / 564012 | 93 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 3 / 23620 | 127 | |
| juvenile | 1 / 55556 | 17 |  |
| adult | 86 / 1939121 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 4 / 17475 | 228 |  |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 13 / 263845 | 49 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 6 / 136302 | 44 | |
| kidney tumor | 8 / 68959 | 116 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 780 / 3360307 | 232 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 5 / 46356 | 107 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 5 / 29757 | 168 | |
| blood | 1 / 123478 | 8 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 725 / 1100989 | 658 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 32 / 211054 | 151 | |
| heart | 5 / 89626 | 55 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 15 / 211777 | 70 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 22 / 336974 | 65 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 5 / 67052 | 74 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 10 / 280825 | 35 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 0 / 96619 | 0 | |
| testis | 17 / 330442 | 51 | |
| thymus | 6 / 81131 | 73 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 12 / 52413 | 228 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_6536_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.49 ± 0.41 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.56 ± 0.37 | |
| Basal Part of Pons | 9.94 ± 0.19 | |
| Cerebellar Cortex | 9.16 ± 0.22 | |
| Cerebellar Nuclei | 9.07 ± 0.41 | |
| Claustrum | 9.59 ± 0.18 | |
| Epithalamus | 7.93 ± 0.95 | |
| Frontal Lobe | 9.3 ± 0.46 | |
| Globus Pallidus | 7.89 ± 0.63 | |
| Hypothalamus | 9 ± 0.55 | |
| Insula | 9.22 ± 0.33 | |
| Limbic Lobe | 9.44 ± 0.46 | |
| Mesencephalon | 8.93 ± 0.64 | |
| Myelencephalon | 9.01 ± 0.7 | |
| Occipital Lobe | 8.84 ± 0.64 | |
| Parietal Lobe | 9.33 ± 0.49 | |
| Pontine Tegmentum | 9.02 ± 0.36 | |
| Striatum | 7.99 ± 0.68 | |
| Subthalamus | 9.54 ± 0.35 | |
| Temporal Lobe | 9.28 ± 0.29 | |
| Thalamus | 8.82 ± 0.42 | |
| White Matter | 6.88 ± 0.47 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Napb | CB | Cerebellum | 100 | |
| 100 | | |||
| Napb | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Napb | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Napb | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Napb | HY | Hypothalamus | 100 | |
| 100 | | |||
| Napb | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Napb | MB | Midbrain | 100 | |
| 100 | | |||
| Napb | MY | Medulla | 100 | |
| 100 | | |||
| Napb | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Napb | P | Pons | 100 | |
| 100 | | |||
| Napb | PAL | Pallidum | 100 | |
| 100 | | |||
| Napb | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Napb | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Napb | STR | Striatum | 100 | |
| 100 | | |||
| Napb | STRd | Striatum dorsal region | 100 | |
| 95.58 | | |||
| Napb | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Napb | TH | Thalamus | 100 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00000421 | 27 | 141 | 167 | AIAHYEQSADYYKGEESNSSANKCLLK | Peptide Atlas |