AutismKB 2.0

Annotation Detail for RBM26


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Basic Information Top
Gene Symbol:RBM26 ( ARRS2,C13orf10,FLJ20957,MGC133295,MGC133296,RP11-255E21.1,SE70-2,ZC3H17 )
Gene Full Name: RNA binding motif protein 26
Band: 13q31.1
Quick LinksEntrez ID:64062; OMIM: NA; Uniprot ID:RBM26_HUMAN; ENSEMBL ID: ENSG00000139746; HGNC ID: 20327
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst6 / 6231996
fetus55 / 56401297
neonate2 / 3109764
infant1 / 2362042
juvenile1 / 5555617
adult98 / 193912150
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor4 / 9417842
cervical tumor0 / 343660 
chondrosarcoma6 / 8282372
colorectal tumor4 / 11424635
esophageal tumor0 / 172900 
gastrointestinal tumor6 / 11936950
germ cell tumor10 / 26384537
glioma4 / 10688337
head and neck tumor7 / 13630251
kidney tumor1 / 6895914
leukemia9 / 9584293
liver tumor4 / 9635941
lung tumor1 / 1031279
lymphoma3 / 7175541
non-neoplasia6 / 9725061
normal186 / 336030755
ovarian tumor9 / 76682117
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer5 / 10268048
retinoblastoma0 / 463560 
skin tumor4 / 12494932
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites4 / 4001599
bladder2 / 2975767
blood8 / 12347864
bone6 / 7165583
bone marrow4 / 4880181
brain37 / 110098933
cervix0 / 481710 
connective tissue3 / 14925520
ear1 / 1621261
embryonic tissue19 / 21572288
esophagus0 / 202090 
eye13 / 21105461
heart7 / 8962678
intestine10 / 23447242
kidney13 / 21177761
larynx1 / 2414541
liver12 / 20774357
lung8 / 33697423
lymph3 / 4427067
lymph node9 / 9161098
mammary gland9 / 15327158
mouth5 / 6705274
muscle9 / 10771583
nerve0 / 157680 
ovary11 / 102051107
pancreas8 / 21481237
parathyroid2 / 2053997
pharynx1 / 4132824
pituitary gland2 / 16585120
placenta18 / 28082564
prostate6 / 18934531
salivary gland0 / 201550 
skin6 / 21057428
spleen3 / 5395255
stomach2 / 9661920
testis16 / 33044248
thymus8 / 8113198
thyroid1 / 4747321
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus12 / 23287851
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218422_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts184.55
Adipocyte22.5
AdrenalCortex59.8
Adrenalgland10.35
Amygdala150.1
Appendix46.3
AtrioventricularNode15.5
BDCA4+_DentriticCells128.55
Bonemarrow12.9
BronchialEpithelialCells33.3
CD105+_Endothelial117.2
CD14+_Monocytes43.9
CD19+_BCells(neg._sel.)140.65
CD33+_Myeloid120.85
CD34+247.5
CD4+_Tcells318.45
CD56+_NKCells162.85
CD71+_EarlyErythroid37.95
CD8+_Tcells370.75
CardiacMyocytes70.75
Caudatenucleus36.25
Cerebellum12.15
CerebellumPeduncles49.8
CiliaryGanglion17.3
CingulateCortex40.15
Colorectaladenocarcinoma100.9
DorsalRootGanglion22.2
FetalThyroid47.7
Fetalbrain65.45
Fetalliver38.95
Fetallung24.45
GlobusPallidus30.45
Heart20.35
Hypothalamus49.45
Kidney12
Leukemia_chronicMyelogenousK-56233.05
Leukemia_promyelocytic-HL-6047.25
Leukemialymphoblastic(MOLT-4)39.3
Liver20.8
Lung12.2
Lymphnode48.4
Lymphoma_burkitts(Daudi)63.45
Lymphoma_burkitts(Raji)117.65
MedullaOblongata37.9
OccipitalLobe60.6
OlfactoryBulb30.05
Ovary23
Pancreas77.7
PancreaticIslet65.8
ParietalLobe45.1
Pituitary70.7
Placenta18.3
Pons30.8
PrefrontalCortex63.8
Prostate45.9
Salivarygland25.1
SkeletalMuscle28.1
Skin33.35
SmoothMuscle30.15
Spinalcord36.05
SubthalamicNucleus34.3
SuperiorCervicalGanglion34.9
TemporalLobe25.1
Testis10.45
TestisGermCell36.9
TestisIntersitial36.95
TestisLeydigCell39.25
TestisSeminiferousTubule35.25
Thalamus25.35
Thymus25.05
Thyroid230.35
Tongue46.75
Tonsil73.5
Trachea25.45
TrigeminalGanglion22.95
Uterus96.45
UterusCorpus27.95
WholeBlood35.7
Wholebrain28.55
colon57.35
pineal_day172.12
pineal_night169.62
retina45.025
small_intestine25.45
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_2153_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.53 ± 0.35
Basal Forebrain6.65 ± 0.28
Basal Part of Pons6.87 ± 0.25
Cerebellar Cortex6.96 ± 0.29
Cerebellar Nuclei6.46 ± 0.4
Claustrum6.35 ± 0.44
Epithalamus6.81 ± 0.43
Frontal Lobe6.74 ± 0.37
Globus Pallidus6.57 ± 0.23
Hypothalamus6.67 ± 0.42
Insula6.75 ± 0.23
Limbic Lobe6.79 ± 0.4
Mesencephalon6.61 ± 0.43
Myelencephalon6.68 ± 0.38
Occipital Lobe6.84 ± 0.5
Parietal Lobe6.65 ± 0.34
Pontine Tegmentum6.74 ± 0.31
Striatum7.01 ± 0.36
Subthalamus6.61 ± 0.51
Temporal Lobe6.74 ± 0.32
Thalamus6.7 ± 0.46
White Matter7.24 ± 0.14
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rbm26CBCerebellum30.92
39.49
Rbm26CTXCerebral cortex99.46
81
Rbm26HIPHippocampal region70.63
100
Rbm26HPFHippocampal formation76.47
98.4
Rbm26HYHypothalamus26.84
21.14
Rbm26LSXLateral septal complex34.48
24.96
Rbm26MBMidbrain34.44
30.83
Rbm26MYMedulla50.48
51.77
Rbm26OLFOlfactory bulb92.15
84.13
Rbm26PPons39.76
37.92
Rbm26PALPallidum35.77
30.34
Rbm26RHPRetrohippocampal region89.35
78.31
Rbm26sAMYStriatum-like amygdalar nuclei72.11
56.04
Rbm26STRStriatum66.89
50.42
Rbm26STRdStriatum dorsal region64.76
48.4
Rbm26STRvStriatum ventral region88.77
66.11
Rbm26THThalamus37.86
32.46
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00009265 13 51 63 ALCIDQLDVFLQK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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