Annotation Detail for PARVG
Basic Information Top
| Gene Symbol: | PARVG ( - ) |
|---|---|
| Gene Full Name: | parvin, gamma |
| Band: | 22q13.31 |
| Quick Links | Entrez ID:64098; OMIM: 608122; Uniprot ID:PARVG_HUMAN; ENSEMBL ID: ENSG00000138964; HGNC ID: 14654 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.658995
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 8 / 564012 | 14 |  |
| neonate | 2 / 31097 | 64 |  |
| infant | 3 / 23620 | 127 | |
| juvenile | 4 / 55556 | 71 | |
| adult | 70 / 1939121 | 36 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 18 / 95842 | 187 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 69 / 3360307 | 20 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 29 / 123478 | 234 |  |
| bone | 1 / 71655 | 13 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 14 / 1100989 | 12 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 | |
| heart | 0 / 89626 | 0 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 4 / 67052 | 59 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 9 / 53952 | 166 | |
| stomach | 4 / 96619 | 41 | |
| testis | 2 / 330442 | 6 | |
| thymus | 10 / 81131 | 123 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: A_23_P250413
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 1.81 ± 1.08 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.28 ± 0.29 | |
| Basal Part of Pons | 1.62 ± 0.52 | |
| Cerebellar Cortex | 1.49 ± 0.68 | |
| Cerebellar Nuclei | 2.31 ± 0.75 | |
| Claustrum | 2.22 ± 0.67 | |
| Epithalamus | 1.95 ± 0.74 | |
| Frontal Lobe | 1.45 ± 0.74 | |
| Globus Pallidus | 2.65 ± 0.42 | |
| Hypothalamus | 1.54 ± 0.94 | |
| Insula | 1.43 ± 0.68 | |
| Limbic Lobe | 1.53 ± 0.78 | |
| Mesencephalon | 1.65 ± 0.75 | |
| Myelencephalon | 1.65 ± 0.75 | |
| Occipital Lobe | 1.4 ± 0.62 | |
| Parietal Lobe | 1.5 ± 0.74 | |
| Pontine Tegmentum | 1.53 ± 0.7 | |
| Striatum | 1.71 ± 0.68 | |
| Subthalamus | 1.54 ± 0.54 | |
| Temporal Lobe | 1.66 ± 0.79 | |
| Thalamus | 1.74 ± 0.57 | |
| White Matter | 2.76 ± 0.59 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Parvg | CB | Cerebellum | 10.25 | |
| 12.88 | | |||
| Parvg | CTX | Cerebral cortex | 5.02 | |
| 3.8 | | |||
| Parvg | HIP | Hippocampal region | 18.01 | |
| 19.01 | | |||
| Parvg | HPF | Hippocampal formation | 17.39 | |
| 17.2 | | |||
| Parvg | HY | Hypothalamus | 4.02 | |
| 4.16 | | |||
| Parvg | LSX | Lateral septal complex | 3.33 | |
| 2.46 | | |||
| Parvg | MB | Midbrain | 5.41 | |
| 6.26 | | |||
| Parvg | MY | Medulla | 14.85 | |
| 20.52 | | |||
| Parvg | OLF | Olfactory bulb | 9.96 | |
| 7.6 | | |||
| Parvg | P | Pons | 11.16 | |
| 13.4 | | |||
| Parvg | PAL | Pallidum | 4.1 | |
| 3.82 | | |||
| Parvg | RHP | Retrohippocampal region | 15.68 | |
| 14.1 | | |||
| Parvg | sAMY | Striatum-like amygdalar nuclei | 4.99 | |
| 3.52 | | |||
| Parvg | STR | Striatum | 2.24 | |
| 1.82 | | |||
| Parvg | STRd | Striatum dorsal region | 1.03 | |
| 0.79 | | |||
| Parvg | STRv | Striatum ventral region | 4.15 | |
| 3.66 | | |||
| Parvg | TH | Thalamus | 5.77 | |
| 5.02 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PARVG_HUMAN_0 | 0 | 0 | 0 | DLLSTLHLLVALAK | PRIDE |
| PARVG_HUMAN_0 | 0 | 0 | 0 | LTVVLEAVNR | PRIDE |
| PARVG_HUMAN_0 | 0 | 0 | 0 | VLMEWINATLLPEHIVVR | PRIDE |
| PARVG_HUMAN_48 | 18 | 48 | 65 | VLMEWINATLLPEHIVVR | PRIDE |
| PARVG_HUMAN_66 | 18 | 66 | 83 | SLEEDMFDGLILHHLFQR | PRIDE |