Annotation Detail for LMBR1
Basic Information Top
| Gene Symbol: | LMBR1 ( ACHP,C7orf2,DIF14,FLJ11665,PPD2,TPT ) |
|---|---|
| Gene Full Name: | limb region 1 homolog (mouse) |
| Band: | 7q36.3 |
| Quick Links | Entrez ID:64327; OMIM: 605522; Uniprot ID:LMBR1_HUMAN; ENSEMBL ID: ENSG00000105983; HGNC ID: 13243 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.209989
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 40 / 564012 | 70 | |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 4 / 55556 | 71 | |
| adult | 70 / 1939121 | 36 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 9 / 114246 | 78 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 9 / 119369 | 75 | |
| germ cell tumor | 22 / 263845 | 83 | |
| glioma | 9 / 106883 | 84 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 207 / 3360307 | 61 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | |
| prostate cancer | 1 / 102680 | 9 |  |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 2 / 29757 | 67 | |
| blood | 8 / 123478 | 64 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 85 / 1100989 | 77 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 15 / 215722 | 69 | |
| esophagus | 2 / 20209 | 98 | |
| eye | 20 / 211054 | 94 | |
| heart | 5 / 89626 | 55 | |
| intestine | 15 / 234472 | 63 | |
| kidney | 9 / 211777 | 42 | |
| larynx | 1 / 24145 | 41 | |
| liver | 5 / 207743 | 24 | |
| lung | 9 / 336974 | 26 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 7 / 91610 | 76 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 14 / 214812 | 65 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 9 / 280825 | 32 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 13 / 210574 | 61 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 5 / 96619 | 51 | |
| testis | 30 / 330442 | 90 | |
| thymus | 8 / 81131 | 98 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 7 / 51780 | 135 | |
- Probe name: A_23_P215214
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.49 ± 0.37 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.51 ± 0.41 | |
| Basal Part of Pons | 5.28 ± 0.41 | |
| Cerebellar Cortex | 5.32 ± 0.25 | |
| Cerebellar Nuclei | 5.33 ± 0.46 | |
| Claustrum | 5.4 ± 0.35 | |
| Epithalamus | 5.2 ± 0.41 | |
| Frontal Lobe | 5.45 ± 0.36 | |
| Globus Pallidus | 5.03 ± 0.48 | |
| Hypothalamus | 5.46 ± 0.34 | |
| Insula | 5.53 ± 0.43 | |
| Limbic Lobe | 5.52 ± 0.46 | |
| Mesencephalon | 5.44 ± 0.5 | |
| Myelencephalon | 5.42 ± 0.38 | |
| Occipital Lobe | 5.63 ± 0.38 | |
| Parietal Lobe | 5.52 ± 0.38 | |
| Pontine Tegmentum | 5.43 ± 0.54 | |
| Striatum | 5.94 ± 0.33 | |
| Subthalamus | 5.75 ± 0.38 | |
| Temporal Lobe | 5.4 ± 0.39 | |
| Thalamus | 5.43 ± 0.39 | |
| White Matter | 5.21 ± 0.17 | |
Mouse Brain ISH 