AutismKB 2.0

Annotation Detail for GAGE10


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Basic Information Top
Gene Symbol:GAGE10 ( - )
Gene Full Name: G antigen 10
Band: Xp11.23
Quick LinksEntrez ID:643832; OMIM: 300737; Uniprot ID:GAG10_HUMAN; ENSEMBL ID: ENSG00000215274; HGNC ID: 30968
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult2 / 19391211
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal1 / 33603070 
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate1 / 1893455
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis1 / 3304423
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 207739_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts10.75
Adipocyte7.05
AdrenalCortex10.6
Adrenalgland6.2
Amygdala7.25
Appendix7.7
AtrioventricularNode13.3
BDCA4+_DentriticCells6.9
Bonemarrow7.45
BronchialEpithelialCells7
CD105+_Endothelial7.3
CD14+_Monocytes7.15
CD19+_BCells(neg._sel.)7.35
CD33+_Myeloid9.1
CD34+8.65
CD4+_Tcells7.55
CD56+_NKCells8.3
CD71+_EarlyErythroid6.8
CD8+_Tcells6.75
CardiacMyocytes10.5
Caudatenucleus6.45
Cerebellum5.85
CerebellumPeduncles8.7
CiliaryGanglion12.2
CingulateCortex7.4
Colorectaladenocarcinoma7.05
DorsalRootGanglion7.9
FetalThyroid7.15
Fetalbrain7.1
Fetalliver6.3
Fetallung5.55
GlobusPallidus5.4
Heart10.1
Hypothalamus7.65
Kidney6.05
Leukemia_chronicMyelogenousK-5621348.3
Leukemia_promyelocytic-HL-606.35
Leukemialymphoblastic(MOLT-4)5.7
Liver9.7
Lung7.7
Lymphnode6.2
Lymphoma_burkitts(Daudi)9.35
Lymphoma_burkitts(Raji)10.35
MedullaOblongata6.35
OccipitalLobe6.45
OlfactoryBulb5.65
Ovary6.8
Pancreas6.4
PancreaticIslet7.7
ParietalLobe7.75
Pituitary8.45
Placenta7.25
Pons7.1
PrefrontalCortex8.75
Prostate8.15
Salivarygland5.85
SkeletalMuscle13.4
Skin10.2
SmoothMuscle8.3
Spinalcord7.4
SubthalamicNucleus8.05
SuperiorCervicalGanglion10.75
TemporalLobe6.65
Testis1677.5
TestisGermCell1222.85
TestisIntersitial987.8
TestisLeydigCell548.6
TestisSeminiferousTubule1527.5
Thalamus7.35
Thymus5.45
Thyroid8.65
Tongue14.8
Tonsil7.05
Trachea6.05
TrigeminalGanglion9.9
Uterus5.75
UterusCorpus8.85
WholeBlood7.4
Wholebrain5.75
colon7.15
pineal_day8.8
pineal_night8.58
retina8.675
small_intestine6.8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6314_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.37 ± 0.95
Basal Forebrain2.07 ± 0.37
Basal Part of Pons1.8 ± 0.63
Cerebellar Cortex1.67 ± 0.5
Cerebellar Nuclei2.24 ± 0.74
Claustrum2.92 ± 0.93
Epithalamus2.29 ± 0.86
Frontal Lobe1.85 ± 0.67
Globus Pallidus2.4 ± 0.29
Hypothalamus1.98 ± 0.55
Insula1.78 ± 0.48
Limbic Lobe2.05 ± 0.68
Mesencephalon2.11 ± 0.7
Myelencephalon2.05 ± 0.69
Occipital Lobe2.23 ± 0.67
Parietal Lobe1.96 ± 0.62
Pontine Tegmentum2.11 ± 0.69
Striatum2.87 ± 0.73
Subthalamus2.11 ± 0.7
Temporal Lobe1.91 ± 0.72
Thalamus1.92 ± 0.63
White Matter2.27 ± 0.17
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00433455 16 34 49 EVEPATPEEGEPATQR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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