AutismKB 2.0

Annotation Detail for CTAGE1


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Basic Information Top
Gene Symbol:CTAGE1 ( CT21.1,CT21.2,CTAGE,CTAGE-1,CTAGE-2 )
Gene Full Name: cutaneous T-cell lymphoma-associated antigen 1
Band: 18q11.2
Quick LinksEntrez ID:64693; OMIM: 608856; Uniprot ID:CTGE2_HUMAN; ENSEMBL ID: ENSG00000212710; HGNC ID: 24346
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult1 / 19391210 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal8 / 33603072
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney1 / 2117774
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta1 / 2808253
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis8 / 33044224
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220957_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.65
Adipocyte4.4
AdrenalCortex4.85
Adrenalgland3.9
Amygdala4.7
Appendix5.05
AtrioventricularNode3.7
BDCA4+_DentriticCells4.7
Bonemarrow4.65
BronchialEpithelialCells4.4
CD105+_Endothelial4.6
CD14+_Monocytes4.75
CD19+_BCells(neg._sel.)4.75
CD33+_Myeloid5.7
CD34+5.6
CD4+_Tcells4.7
CD56+_NKCells5.2
CD71+_EarlyErythroid4.25
CD8+_Tcells4.2
CardiacMyocytes6.25
Caudatenucleus4.05
Cerebellum3.65
CerebellumPeduncles5.15
CiliaryGanglion3.35
CingulateCortex4.65
Colorectaladenocarcinoma4.55
DorsalRootGanglion3.65
FetalThyroid4.4
Fetalbrain4.4
Fetalliver4
Fetallung3.65
GlobusPallidus3.4
Heart6.1
Hypothalamus4.85
Kidney3.8
Leukemia_chronicMyelogenousK-5624.1
Leukemia_promyelocytic-HL-603.95
Leukemialymphoblastic(MOLT-4)3.55
Liver6.15
Lung4.9
Lymphnode3.85
Lymphoma_burkitts(Daudi)5.75
Lymphoma_burkitts(Raji)6.55
MedullaOblongata4.05
OccipitalLobe4.05
OlfactoryBulb3.55
Ovary3.05
Pancreas3.65
PancreaticIslet4.8
ParietalLobe4.85
Pituitary5.25
Placenta4.55
Pons4.3
PrefrontalCortex5.45
Prostate5.15
Salivarygland3.7
SkeletalMuscle5.55
Skin3.55
SmoothMuscle5.1
Spinalcord4.75
SubthalamicNucleus4.15
SuperiorCervicalGanglion6
TemporalLobe4.25
Testis3.85
TestisGermCell3.85
TestisIntersitial4.35
TestisLeydigCell4.55
TestisSeminiferousTubule3.85
Thalamus4.6
Thymus3.45
Thyroid5.6
Tongue4.5
Tonsil4.4
Trachea3.75
TrigeminalGanglion5
Uterus3.65
UterusCorpus4.2
WholeBlood4.9
Wholebrain3.75
colon4.6
pineal_day5.74
pineal_night5.44
retina5.475
small_intestine4.4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P124805
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.19 ± 0.46
Basal Forebrain3.73 ± 0.57
Basal Part of Pons3.8 ± 0.38
Cerebellar Cortex3.85 ± 0.45
Cerebellar Nuclei3.34 ± 0.4
Claustrum4.02 ± 0.76
Epithalamus2.9 ± 0.72
Frontal Lobe3.62 ± 0.75
Globus Pallidus3.77 ± 0.76
Hypothalamus3.5 ± 0.59
Insula3.71 ± 0.65
Limbic Lobe4.01 ± 0.69
Mesencephalon3.48 ± 0.64
Myelencephalon3.62 ± 0.6
Occipital Lobe3.78 ± 0.8
Parietal Lobe3.73 ± 0.8
Pontine Tegmentum3.69 ± 0.68
Striatum3.49 ± 0.72
Subthalamus3.52 ± 0.23
Temporal Lobe3.63 ± 0.7
Thalamus3.55 ± 0.6
White Matter3.47 ± 0.42
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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