AutismKB 2.0

Annotation Detail for FAM160B2


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Basic Information Top
Gene Symbol:FAM160B2 ( FLJ11125,FLJ21801,MGC138352,RAI16 )
Gene Full Name: family with sequence similarity 160, member B2
Band: 8p21.3
Quick LinksEntrez ID:64760; OMIM: NA; Uniprot ID:F16B2_HUMAN; ENSEMBL ID: ENSG00000158863; HGNC ID: 16492
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst3 / 6231948
fetus16 / 56401228
neonate0 / 310970 
infant1 / 2362042
juvenile0 / 555560 
adult76 / 193912139
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor1 / 3436629
chondrosarcoma9 / 82823108
colorectal tumor2 / 11424617
esophageal tumor1 / 1729057
gastrointestinal tumor4 / 11936933
germ cell tumor12 / 26384545
glioma13 / 106883121
head and neck tumor2 / 13630214
kidney tumor7 / 68959101
leukemia9 / 9584293
liver tumor1 / 9635910
lung tumor7 / 10312767
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal114 / 336030733
ovarian tumor4 / 7668252
pancreatic tumor9 / 10461686
primitive neuroectodermal tumor of the CNS4 / 12568031
prostate cancer2 / 10268019
retinoblastoma1 / 4635621
skin tumor4 / 12494932
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder1 / 2975733
blood2 / 12347816
bone3 / 7165541
bone marrow0 / 488010 
brain50 / 110098945
cervix1 / 4817120
connective tissue7 / 14925546
ear0 / 162120 
embryonic tissue8 / 21572237
esophagus1 / 2020949
eye10 / 21105447
heart2 / 8962622
intestine7 / 23447229
kidney9 / 21177742
larynx0 / 241450 
liver2 / 2077439
lung17 / 33697450
lymph0 / 442700 
lymph node5 / 9161054
mammary gland1 / 1532716
mouth2 / 6705229
muscle4 / 10771537
nerve0 / 157680 
ovary5 / 10205148
pancreas12 / 21481255
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta21 / 28082574
prostate7 / 18934536
salivary gland0 / 201550 
skin4 / 21057418
spleen4 / 5395274
stomach4 / 9661941
testis7 / 33044221
thymus6 / 8113173
thyroid1 / 4747321
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus7 / 23287830
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218337_at
Cell line Expression level Expression bar
721_B_lymphoblasts10.05
Adipocyte5.1
AdrenalCortex4.95
Adrenalgland4.1
Amygdala5.35
Appendix4.85
AtrioventricularNode2.9
BDCA4+_DentriticCells8.7
Bonemarrow3.65
BronchialEpithelialCells5.4
CD105+_Endothelial4.6
CD14+_Monocytes5.3
CD19+_BCells(neg._sel.)10.15
CD33+_Myeloid8.2
CD34+13.3
CD4+_Tcells23.9
CD56+_NKCells18
CD71+_EarlyErythroid4.15
CD8+_Tcells20.6
CardiacMyocytes5.8
Caudatenucleus4.4
Cerebellum4
CerebellumPeduncles5.55
CiliaryGanglion3.3
CingulateCortex5.1
Colorectaladenocarcinoma6.8
DorsalRootGanglion2.9
FetalThyroid6.7
Fetalbrain5.4
Fetalliver3.3
Fetallung4.2
GlobusPallidus3.05
Heart8.45
Hypothalamus7.55
Kidney3.55
Leukemia_chronicMyelogenousK-5626.55
Leukemia_promyelocytic-HL-604.35
Leukemialymphoblastic(MOLT-4)9
Liver5.9
Lung13.75
Lymphnode13.05
Lymphoma_burkitts(Daudi)6.25
Lymphoma_burkitts(Raji)6.75
MedullaOblongata4.6
OccipitalLobe4.5
OlfactoryBulb4.1
Ovary3.25
Pancreas4.5
PancreaticIslet5.25
ParietalLobe5.1
Pituitary5.8
Placenta7.4
Pons4.55
PrefrontalCortex6.35
Prostate31.05
Salivarygland3.9
SkeletalMuscle5.1
Skin3.5
SmoothMuscle5.1
Spinalcord7.05
SubthalamicNucleus3.6
SuperiorCervicalGanglion4.6
TemporalLobe4.1
Testis4.25
TestisGermCell3.95
TestisIntersitial3.7
TestisLeydigCell4.45
TestisSeminiferousTubule4.25
Thalamus5.6
Thymus4.05
Thyroid21.55
Tongue4.7
Tonsil4.8
Trachea4.2
TrigeminalGanglion4.75
Uterus7.4
UterusCorpus4.35
WholeBlood5.5
Wholebrain4.95
colon5
pineal_day9.04
pineal_night8.62
retina8.65
small_intestine4.8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P76120
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.79 ± 0.76
Basal Forebrain8.24 ± 0.46
Basal Part of Pons7.98 ± 0.46
Cerebellar Cortex7.52 ± 0.47
Cerebellar Nuclei8.37 ± 1.25
Claustrum8.63 ± 0.92
Epithalamus9.69 ± 1
Frontal Lobe7.91 ± 0.86
Globus Pallidus10.83 ± 1.21
Hypothalamus8.51 ± 1.68
Insula7.65 ± 0.81
Limbic Lobe7.84 ± 0.96
Mesencephalon8.33 ± 0.96
Myelencephalon8.36 ± 1
Occipital Lobe7.81 ± 0.91
Parietal Lobe7.94 ± 0.9
Pontine Tegmentum7.79 ± 1.01
Striatum8.05 ± 1.02
Subthalamus8.33 ± 0.31
Temporal Lobe7.73 ± 0.83
Thalamus8.04 ± 0.71
White Matter9.17 ± 0.68
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rai16CBCerebellum11.22
12.35
Rai16CTXCerebral cortex30.27
21.82
Rai16HIPHippocampal region20.3
20.76
Rai16HPFHippocampal formation19.27
17.19
Rai16HYHypothalamus3.27
2.39
Rai16LSXLateral septal complex3.5
2.33
Rai16MBMidbrain10.67
10.08
Rai16MYMedulla11.87
10.82
Rai16OLFOlfactory bulb27.51
19.26
Rai16PPons9.95
9.67
Rai16PALPallidum5.78
4.32
Rai16RHPRetrohippocampal region17.89
12.4
Rai16sAMYStriatum-like amygdalar nuclei6.75
4.14
Rai16STRStriatum25.14
16.63
Rai16STRdStriatum dorsal region31.2
20.65
Rai16STRvStriatum ventral region30.21
19.56
Rai16THThalamus14.46
11.57
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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