Annotation Detail for CCDC14
Basic Information Top
| Gene Symbol: | CCDC14 ( DKFZp434L1050,FLJ12892,FLJ41065 ) |
|---|---|
| Gene Full Name: | coiled-coil domain containing 14 |
| Band: | 3q21.1 |
| Quick Links | Entrez ID:64770; OMIM: NA; Uniprot ID:CCD14_HUMAN; ENSEMBL ID: ENSG00000175455; HGNC ID: 25766 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.645028
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 6 / 70761 | 84 |  |
| blastocyst | 9 / 62319 | 144 | |
| fetus | 42 / 564012 | 74 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 |  |
| juvenile | 3 / 55556 | 53 | |
| adult | 100 / 1939121 | 51 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 23 / 114246 | 201 |  |
| esophageal tumor | 3 / 17290 | 173 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 12 / 136302 | 88 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 1 / 103127 | 9 |  |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 170 / 3360307 | 50 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 6 / 102680 | 58 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 11 / 125191 | 87 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 3 / 29757 | 100 | |
| blood | 3 / 123478 | 24 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 43 / 1100989 | 39 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 12 / 149255 | 80 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 25 / 215722 | 115 | |
| esophagus | 3 / 20209 | 148 | |
| eye | 7 / 211054 | 33 | |
| heart | 6 / 89626 | 66 | |
| intestine | 26 / 234472 | 110 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 18 / 336974 | 53 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 14 / 91610 | 152 | |
| mammary gland | 12 / 153271 | 78 | |
| mouth | 9 / 67052 | 134 | |
| muscle | 8 / 107715 | 74 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 10 / 189345 | 52 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 44 / 330442 | 133 | |
| thymus | 13 / 81131 | 160 | |
| thyroid | 4 / 47473 | 84 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 7 / 52413 | 133 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 12 / 232878 | 51 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_13022_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.95 ± 0.46 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.69 ± 0.19 | |
| Basal Part of Pons | 7.27 ± 0.23 | |
| Cerebellar Cortex | 6.94 ± 0.36 | |
| Cerebellar Nuclei | 7.12 ± 0.35 | |
| Claustrum | 8.16 ± 0.35 | |
| Epithalamus | 7.63 ± 0.44 | |
| Frontal Lobe | 7.35 ± 0.44 | |
| Globus Pallidus | 8.14 ± 0.21 | |
| Hypothalamus | 7.55 ± 0.35 | |
| Insula | 7.49 ± 0.33 | |
| Limbic Lobe | 7.63 ± 0.45 | |
| Mesencephalon | 7.59 ± 0.4 | |
| Myelencephalon | 7.55 ± 0.52 | |
| Occipital Lobe | 7.92 ± 0.54 | |
| Parietal Lobe | 7.58 ± 0.5 | |
| Pontine Tegmentum | 7.45 ± 0.51 | |
| Striatum | 7.84 ± 0.36 | |
| Subthalamus | 8.47 ± 0.06 | |
| Temporal Lobe | 7.44 ± 0.49 | |
| Thalamus | 7.42 ± 0.3 | |
| White Matter | 8.42 ± 0.3 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| G630039H03Rik | CB | Cerebellum | 5.57 | |
| 5.95 | | |||
| G630039H03Rik | CTX | Cerebral cortex | 2.8 | |
| 2.44 | | |||
| G630039H03Rik | HIP | Hippocampal region | 2.62 | |
| 2.41 | | |||
| G630039H03Rik | HPF | Hippocampal formation | 2.79 | |
| 2.28 | | |||
| G630039H03Rik | HY | Hypothalamus | 0.29 | |
| 0.23 | | |||
| G630039H03Rik | LSX | Lateral septal complex | 0.12 | |
| 0.58 | | |||
| G630039H03Rik | MB | Midbrain | 0.88 | |
| 0.86 | | |||
| G630039H03Rik | MY | Medulla | 3.48 | |
| 4.54 | | |||
| G630039H03Rik | OLF | Olfactory bulb | 5.87 | |
| 4.7 | | |||
| G630039H03Rik | P | Pons | 1.47 | |
| 1.72 | | |||
| G630039H03Rik | PAL | Pallidum | 0.56 | |
| 0.65 | | |||
| G630039H03Rik | RHP | Retrohippocampal region | 2.96 | |
| 1.97 | | |||
| G630039H03Rik | sAMY | Striatum-like amygdalar nuclei | 0.71 | |
| 0.42 | | |||
| G630039H03Rik | STR | Striatum | 0.7 | |
| 0.64 | | |||
| G630039H03Rik | STRd | Striatum dorsal region | 0.62 | |
| 0.68 | | |||
| G630039H03Rik | STRv | Striatum ventral region | 1.11 | |
| 0.67 | | |||
| G630039H03Rik | TH | Thalamus | 1.1 | |
| 0.83 | |