Annotation Detail for FNDC4
Basic Information Top
| Gene Symbol: | FNDC4 ( FLJ22362,FRCP1 ) |
|---|---|
| Gene Full Name: | fibronectin type III domain containing 4 |
| Band: | 2p23.3 |
| Quick Links | Entrez ID:64838; OMIM: 611905; Uniprot ID:FNDC4_HUMAN; ENSEMBL ID: ENSG00000115226; HGNC ID: 20239 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 218843_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 7 |  |
| Adipocyte | 38.05 |  |
| AdrenalCortex | 29.35 | |
| Adrenalgland | 19.8 | |
| Amygdala | 8.3 | |
| Appendix | 8 | |
| AtrioventricularNode | 5.9 | |
| BDCA4+_DentriticCells | 5.65 | |
| Bonemarrow | 10.6 | |
| BronchialEpithelialCells | 7.55 | |
| CD105+_Endothelial | 5.95 | |
| CD14+_Monocytes | 5.7 | |
| CD19+_BCells(neg._sel.) | 6.35 | |
| CD33+_Myeloid | 8.25 | |
| CD34+ | 7.45 | |
| CD4+_Tcells | 6.5 | |
| CD56+_NKCells | 6.95 | |
| CD71+_EarlyErythroid | 6.05 | |
| CD8+_Tcells | 5.6 | |
| CardiacMyocytes | 9.35 | |
| Caudatenucleus | 12.6 | |
| Cerebellum | 21.65 | |
| CerebellumPeduncles | 13.9 | |
| CiliaryGanglion | 5.05 | |
| CingulateCortex | 38.1 | |
| Colorectaladenocarcinoma | 6.6 | |
| DorsalRootGanglion | 5.75 | |
| FetalThyroid | 7.35 | |
| Fetalbrain | 18.55 | |
| Fetalliver | 6.95 | |
| Fetallung | 6.8 | |
| GlobusPallidus | 11.2 | |
| Heart | 8.35 | |
| Hypothalamus | 11.35 | |
| Kidney | 6.1 | |
| Leukemia_chronicMyelogenousK-562 | 8.2 | |
| Leukemia_promyelocytic-HL-60 | 5.9 | |
| Leukemialymphoblastic(MOLT-4) | 6 | |
| Liver | 17.05 | |
| Lung | 6.4 | |
| Lymphnode | 5.9 | |
| Lymphoma_burkitts(Daudi) | 9.55 | |
| Lymphoma_burkitts(Raji) | 7.9 | |
| MedullaOblongata | 18.7 | |
| OccipitalLobe | 16.7 | |
| OlfactoryBulb | 6.05 | |
| Ovary | 10.9 | |
| Pancreas | 6.5 | |
| PancreaticIslet | 10.45 | |
| ParietalLobe | 15.15 | |
| Pituitary | 9.3 | |
| Placenta | 6.75 | |
| Pons | 12.65 | |
| PrefrontalCortex | 12.9 | |
| Prostate | 7.9 | |
| Salivarygland | 6 | |
| SkeletalMuscle | 8 | |
| Skin | 6.75 | |
| SmoothMuscle | 11.7 | |
| Spinalcord | 16 | |
| SubthalamicNucleus | 11.85 | |
| SuperiorCervicalGanglion | 14.4 | |
| TemporalLobe | 29.55 | |
| Testis | 12.7 | |
| TestisGermCell | 10.3 | |
| TestisIntersitial | 9.85 | |
| TestisLeydigCell | 9.75 | |
| TestisSeminiferousTubule | 12.7 | |
| Thalamus | 22.55 | |
| Thymus | 4.7 | |
| Thyroid | 7.25 | |
| Tongue | 6.9 | |
| Tonsil | 7.45 | |
| Trachea | 6.45 | |
| TrigeminalGanglion | 11.5 | |
| Uterus | 4.95 | |
| UterusCorpus | 5.75 | |
| WholeBlood | 7.05 | |
| Wholebrain | 27.25 | |
| colon | 5.2 | |
| pineal_day | 9.4 | |
| pineal_night | 9.12 | |
| retina | 9.3 | |
| small_intestine | 4.85 | |
- Probe name: CUST_9402_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.92 ± 0.39 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.61 ± 0.3 | |
| Basal Part of Pons | 7.63 ± 0.2 | |
| Cerebellar Cortex | 6.89 ± 0.45 | |
| Cerebellar Nuclei | 7.34 ± 0.38 | |
| Claustrum | 6.37 ± 0.43 | |
| Epithalamus | 6.05 ± 0.57 | |
| Frontal Lobe | 7.11 ± 0.54 | |
| Globus Pallidus | 6.55 ± 0.57 | |
| Hypothalamus | 6.13 ± 0.44 | |
| Insula | 6.91 ± 0.34 | |
| Limbic Lobe | 7.12 ± 0.72 | |
| Mesencephalon | 6.83 ± 0.5 | |
| Myelencephalon | 6.92 ± 0.59 | |
| Occipital Lobe | 7.18 ± 0.36 | |
| Parietal Lobe | 7.2 ± 0.47 | |
| Pontine Tegmentum | 6.79 ± 0.57 | |
| Striatum | 6.33 ± 0.42 | |
| Subthalamus | 7.5 ± 0.17 | |
| Temporal Lobe | 6.92 ± 0.53 | |
| Thalamus | 6.93 ± 0.36 | |
| White Matter | 4.67 ± 0.16 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Fndc4 | CB | Cerebellum | 52.57 |  |
| 100 | | |||
| Fndc4 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Fndc4 | HIP | Hippocampal region | 99.3 | |
| 100 | | |||
| Fndc4 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Fndc4 | HY | Hypothalamus | 82.06 | |
| 80.84 | | |||
| Fndc4 | LSX | Lateral septal complex | 76.51 | |
| 73.31 | | |||
| Fndc4 | MB | Midbrain | 93.08 | |
| 97.78 | | |||
| Fndc4 | MY | Medulla | 90.99 | |
| 100 | | |||
| Fndc4 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Fndc4 | P | Pons | 89.19 | |
| 99.02 | | |||
| Fndc4 | PAL | Pallidum | 75.86 | |
| 84.11 | | |||
| Fndc4 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Fndc4 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Fndc4 | STR | Striatum | 84.58 | |
| 78.59 | | |||
| Fndc4 | STRd | Striatum dorsal region | 78.63 | |
| 71.54 | | |||
| Fndc4 | STRv | Striatum ventral region | 79.06 | |
| 73.19 | | |||
| Fndc4 | TH | Thalamus | 100 | |
| 100 | |