AutismKB 2.0

Annotation Detail for SLC30A5


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Basic Information Top
Gene Symbol:SLC30A5 ( FLJ12496,FLJ12756,MGC5499,ZNT5,ZNTL1,ZTL1,ZnT-5 )
Gene Full Name: solute carrier family 30 (zinc transporter), member 5
Band: 5q13.1-q13.2
Quick LinksEntrez ID:64924; OMIM: 607819; Uniprot ID:ZNT5_HUMAN; ENSEMBL ID: ENSG00000145740; HGNC ID: 19089
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body5 / 7076170
blastocyst2 / 6231932
fetus14 / 56401224
neonate2 / 3109764
infant0 / 236200 
juvenile3 / 5555653
adult79 / 193912140
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma1 / 1747557
breast (mammary gland) tumor2 / 9417821
cervical tumor1 / 3436629
chondrosarcoma3 / 8282336
colorectal tumor3 / 11424626
esophageal tumor1 / 1729057
gastrointestinal tumor1 / 1193698
germ cell tumor18 / 26384568
glioma2 / 10688318
head and neck tumor3 / 13630222
kidney tumor3 / 6895943
leukemia6 / 9584262
liver tumor9 / 9635993
lung tumor2 / 10312719
lymphoma2 / 7175527
non-neoplasia2 / 9725020
normal111 / 336030733
ovarian tumor1 / 7668213
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS5 / 12568039
prostate cancer7 / 10268068
retinoblastoma2 / 4635643
skin tumor7 / 12494956
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites0 / 400150 
bladder2 / 2975767
blood6 / 12347848
bone4 / 7165555
bone marrow1 / 4880120
brain24 / 110098921
cervix1 / 4817120
connective tissue0 / 1492550 
ear1 / 1621261
embryonic tissue8 / 21572237
esophagus1 / 2020949
eye8 / 21105437
heart0 / 896260 
intestine5 / 23447221
kidney13 / 21177761
larynx0 / 241450 
liver11 / 20774352
lung5 / 33697414
lymph2 / 4427045
lymph node5 / 9161054
mammary gland5 / 15327132
mouth3 / 6705244
muscle3 / 10771527
nerve0 / 157680 
ovary1 / 1020519
pancreas12 / 21481255
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta16 / 28082556
prostate9 / 18934547
salivary gland0 / 201550 
skin9 / 21057442
spleen1 / 5395218
stomach1 / 9661910
testis12 / 33044236
thymus3 / 8113136
thyroid1 / 4747321
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord0 / 136800 
uterus9 / 23287838
vascular7 / 51780135
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218989_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts43.55
Adipocyte18.2
AdrenalCortex11.2
Adrenalgland8.9
Amygdala10.65
Appendix11.15
AtrioventricularNode9.95
BDCA4+_DentriticCells139.1
Bonemarrow8.7
BronchialEpithelialCells22.1
CD105+_Endothelial12.1
CD14+_Monocytes11.75
CD19+_BCells(neg._sel.)15.35
CD33+_Myeloid21.45
CD34+35.15
CD4+_Tcells23.6
CD56+_NKCells41.9
CD71+_EarlyErythroid9.85
CD8+_Tcells19.6
CardiacMyocytes17.95
Caudatenucleus7.45
Cerebellum7.45
CerebellumPeduncles11.95
CiliaryGanglion8.5
CingulateCortex9.6
Colorectaladenocarcinoma16.15
DorsalRootGanglion8.05
FetalThyroid9.9
Fetalbrain7.45
Fetalliver13.35
Fetallung12.3
GlobusPallidus7.25
Heart12.8
Hypothalamus11.1
Kidney8.7
Leukemia_chronicMyelogenousK-56222.1
Leukemia_promyelocytic-HL-609.65
Leukemialymphoblastic(MOLT-4)11
Liver12.6
Lung8.75
Lymphnode10.1
Lymphoma_burkitts(Daudi)12.45
Lymphoma_burkitts(Raji)15.9
MedullaOblongata8.95
OccipitalLobe9.45
OlfactoryBulb7.85
Ovary7.35
Pancreas7.85
PancreaticIslet24.5
ParietalLobe11.2
Pituitary17.3
Placenta15.8
Pons9.05
PrefrontalCortex11.55
Prostate11.65
Salivarygland9.05
SkeletalMuscle14.85
Skin8.8
SmoothMuscle16.2
Spinalcord10.15
SubthalamicNucleus9.5
SuperiorCervicalGanglion13.5
TemporalLobe9.35
Testis7.7
TestisGermCell13.25
TestisIntersitial7.05
TestisLeydigCell10.15
TestisSeminiferousTubule8.65
Thalamus10.6
Thymus7.1
Thyroid40.3
Tongue10.9
Tonsil9.2
Trachea9.95
TrigeminalGanglion11.95
Uterus25.1
UterusCorpus11.1
WholeBlood11.8
Wholebrain7.6
colon35.25
pineal_day29.9
pineal_night47.58
retina13.65
small_intestine24.05
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6827_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.06 ± 0.42
Basal Forebrain7.21 ± 0.24
Basal Part of Pons7.07 ± 0.39
Cerebellar Cortex7.04 ± 0.41
Cerebellar Nuclei7.49 ± 0.36
Claustrum7.42 ± 0.51
Epithalamus7.41 ± 0.28
Frontal Lobe7.13 ± 0.39
Globus Pallidus7.58 ± 0.2
Hypothalamus7.34 ± 0.32
Insula7.11 ± 0.35
Limbic Lobe7.25 ± 0.37
Mesencephalon7.4 ± 0.39
Myelencephalon7.2 ± 0.33
Occipital Lobe7.55 ± 0.35
Parietal Lobe7.3 ± 0.37
Pontine Tegmentum7.24 ± 0.38
Striatum7.21 ± 0.48
Subthalamus7.46 ± 0.13
Temporal Lobe7.08 ± 0.34
Thalamus7.25 ± 0.3
White Matter7.45 ± 0.37
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00040605 30 372 401 GTLIGYSPEGTPLYNFMGDAFQHSSQSIPR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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