Annotation Detail for RASAL3
Basic Information Top
| Gene Symbol: | RASAL3 ( DKFZp667E013,FLJ00087,FLJ21438 ) |
|---|---|
| Gene Full Name: | RAS protein activator like 3 |
| Band: | 19p13.12 |
| Quick Links | Entrez ID:64926; OMIM: NA; Uniprot ID:RASL3_HUMAN; ENSEMBL ID: ENSG00000105122; HGNC ID: 26129 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.136979
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 4 / 564012 | 7 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 52 / 1939121 | 26 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 9 / 95842 | 93 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 7 / 71755 | 97 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 53 / 3360307 | 15 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 15 / 123478 | 121 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 1 / 1100989 | 0 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 1 / 89626 | 11 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 4 / 336974 | 11 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 5 / 81131 | 61 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 2 / 16999 | 117 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P79069
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.97 ± 0.52 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.89 ± 0.52 | |
| Basal Part of Pons | 6.66 ± 0.2 | |
| Cerebellar Cortex | 5.47 ± 0.34 | |
| Cerebellar Nuclei | 7.38 ± 0.5 | |
| Claustrum | 5.86 ± 0.56 | |
| Epithalamus | 6.81 ± 0.46 | |
| Frontal Lobe | 5.73 ± 0.6 | |
| Globus Pallidus | 7.54 ± 0.43 | |
| Hypothalamus | 5.77 ± 1.05 | |
| Insula | 5.91 ± 0.52 | |
| Limbic Lobe | 5.65 ± 0.56 | |
| Mesencephalon | 5.82 ± 0.75 | |
| Myelencephalon | 5.92 ± 0.64 | |
| Occipital Lobe | 5.4 ± 0.61 | |
| Parietal Lobe | 5.78 ± 0.6 | |
| Pontine Tegmentum | 5.75 ± 0.51 | |
| Striatum | 6.24 ± 0.57 | |
| Subthalamus | 6.74 ± 0.11 | |
| Temporal Lobe | 6.05 ± 0.62 | |
| Thalamus | 5.78 ± 0.52 | |
| White Matter | 7.25 ± 0.58 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| A430107D22Rik | CB | Cerebellum | 35.56 | |
| 56.72 | | |||
| A430107D22Rik | CTX | Cerebral cortex | 19.85 | |
| 14.46 | | |||
| A430107D22Rik | HIP | Hippocampal region | 6.49 | |
| 6.5 | | |||
| A430107D22Rik | HPF | Hippocampal formation | 8.89 | |
| 8.63 | | |||
| A430107D22Rik | HY | Hypothalamus | 5.39 | |
| 4.02 | | |||
| A430107D22Rik | LSX | Lateral septal complex | 2.74 | |
| 1.84 | | |||
| A430107D22Rik | MB | Midbrain | 5.21 | |
| 5.44 | | |||
| A430107D22Rik | MY | Medulla | 8.49 | |
| 8.97 | | |||
| A430107D22Rik | OLF | Olfactory bulb | 22.1 | |
| 21.27 | | |||
| A430107D22Rik | P | Pons | 4.1 | |
| 4.34 | | |||
| A430107D22Rik | PAL | Pallidum | 3.56 | |
| 2.86 | | |||
| A430107D22Rik | RHP | Retrohippocampal region | 13.63 | |
| 12.2 | | |||
| A430107D22Rik | sAMY | Striatum-like amygdalar nuclei | 3.87 | |
| 2.85 | | |||
| A430107D22Rik | STR | Striatum | 7.4 | |
| 5.82 | | |||
| A430107D22Rik | STRd | Striatum dorsal region | 6.74 | |
| 5.33 | | |||
| A430107D22Rik | STRv | Striatum ventral region | 14.95 | |
| 11.56 | | |||
| A430107D22Rik | TH | Thalamus | 7.19 | |
| 5.6 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00004680 | 16 | 891 | 906 | LAELQCEVAALREEQK | Peptide Atlas |
| RASL3_HUMAN_611 | 25 | 611 | 635 | LLCPAILAPSLFGLAPDHPAPGPAR | PRIDE |