Annotation Detail for MRPS26
Basic Information Top
| Gene Symbol: | MRPS26 ( C20orf193,GI008,MRP-S13,MRP-S26,MRPS13,NY-BR-87,RPMS13,dJ534B8.3 ) |
|---|---|
| Gene Full Name: | mitochondrial ribosomal protein S26 |
| Band: | 20p13 |
| Quick Links | Entrez ID:64949; OMIM: 611988; Uniprot ID:RT26_HUMAN; ENSEMBL ID: ENSG00000125901; HGNC ID: 14045 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.18946
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 20 / 564012 | 35 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 85 / 1939121 | 43 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 7 / 94178 | 74 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 13 / 119369 | 108 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 10 / 106883 | 93 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 17 / 96359 | 176 | |
| lung tumor | 8 / 103127 | 77 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 105 / 3360307 | 31 | |
| ovarian tumor | 17 / 76682 | 221 |  |
| pancreatic tumor | 7 / 104616 | 66 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 11 / 124949 | 88 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 2 / 29757 | 67 | |
| blood | 2 / 123478 | 16 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 35 / 1100989 | 31 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 |  |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 8 / 211054 | 37 | |
| heart | 4 / 89626 | 44 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 17 / 207743 | 81 | |
| lung | 30 / 336974 | 89 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 19 / 91610 | 207 | |
| mammary gland | 10 / 153271 | 65 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 8 / 107715 | 74 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 18 / 102051 | 176 | |
| pancreas | 15 / 214812 | 69 | |
| parathyroid | 12 / 20539 | 584 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 8 / 280825 | 28 | |
| prostate | 9 / 189345 | 47 | |
| salivary gland | 2 / 20155 | 99 | |
| skin | 11 / 210574 | 52 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 6 / 96619 | 62 | |
| testis | 9 / 330442 | 27 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P252536
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.95 ± 0.31 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 10.17 ± 0.1 | |
| Basal Part of Pons | 10.33 ± 0.13 | |
| Cerebellar Cortex | 10.23 ± 0.18 | |
| Cerebellar Nuclei | 10.42 ± 0.11 | |
| Claustrum | 9.91 ± 0.31 | |
| Epithalamus | 10.15 ± 0.17 | |
| Frontal Lobe | 10.19 ± 0.23 | |
| Globus Pallidus | 9.77 ± 0.19 | |
| Hypothalamus | 10.44 ± 0.21 | |
| Insula | 10.14 ± 0.2 | |
| Limbic Lobe | 9.98 ± 0.27 | |
| Mesencephalon | 10.11 ± 0.22 | |
| Myelencephalon | 10.1 ± 0.28 | |
| Occipital Lobe | 10.13 ± 0.18 | |
| Parietal Lobe | 10.17 ± 0.28 | |
| Pontine Tegmentum | 10.11 ± 0.23 | |
| Striatum | 10.01 ± 0.27 | |
| Subthalamus | 10.28 ± 0.1 | |
| Temporal Lobe | 10.15 ± 0.24 | |
| Thalamus | 10.1 ± 0.16 | |
| White Matter | 9.54 ± 0.15 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Mrps26 | CB | Cerebellum | 33.58 | |
| 47.16 | | |||
| Mrps26 | CTX | Cerebral cortex | 100 | |
| 92.82 | | |||
| Mrps26 | HIP | Hippocampal region | 80.17 | |
| 100 | | |||
| Mrps26 | HPF | Hippocampal formation | 83.64 | |
| 100 | | |||
| Mrps26 | HY | Hypothalamus | 56.19 | |
| 52.38 | | |||
| Mrps26 | LSX | Lateral septal complex | 58.7 | |
| 44.77 | | |||
| Mrps26 | MB | Midbrain | 66.57 | |
| 65.5 | | |||
| Mrps26 | MY | Medulla | 56.63 | |
| 67.79 | | |||
| Mrps26 | OLF | Olfactory bulb | 84.57 | |
| 79.7 | | |||
| Mrps26 | P | Pons | 57.71 | |
| 69.28 | | |||
| Mrps26 | PAL | Pallidum | 58.53 | |
| 61.26 | | |||
| Mrps26 | RHP | Retrohippocampal region | 88.56 | |
| 81.96 | | |||
| Mrps26 | sAMY | Striatum-like amygdalar nuclei | 58.15 | |
| 47.92 | | |||
| Mrps26 | STR | Striatum | 59.9 | |
| 46.36 | | |||
| Mrps26 | STRd | Striatum dorsal region | 58.1 | |
| 44.55 | | |||
| Mrps26 | STRv | Striatum ventral region | 65.15 | |
| 49.41 | | |||
| Mrps26 | TH | Thalamus | 61.88 | |
| 60.55 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00080661 | 18 | 42 | 59 | VNMPPAVDPAEFFVLMER | Peptide Atlas |
| RT26_HUMAN_41 | 18 | 41 | 58 | VNMPPAVDPAEFFVLMER | PRIDE |
| RT26_HUMAN_71 | 9 | 71 | 79 | MEFVSEVQR | PRIDE |