AutismKB 2.0

Annotation Detail for MRPS11


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Basic Information Top
Gene Symbol:MRPS11 ( FLJ22512,FLJ23406,HCC-2 )
Gene Full Name: mitochondrial ribosomal protein S11
Band: 15q25.3
Quick LinksEntrez ID:64963; OMIM: 611977; Uniprot ID:RT11_HUMAN; ENSEMBL ID: ENSG00000181991; HGNC ID: 14050
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst4 / 6231964
fetus28 / 56401249
neonate2 / 3109764
infant1 / 2362042
juvenile3 / 5555653
adult116 / 193912159
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor4 / 34366116
chondrosarcoma6 / 8282372
colorectal tumor7 / 11424661
esophageal tumor0 / 172900 
gastrointestinal tumor21 / 119369175
germ cell tumor5 / 26384518
glioma3 / 10688328
head and neck tumor5 / 13630236
kidney tumor7 / 68959101
leukemia4 / 9584241
liver tumor8 / 9635983
lung tumor10 / 10312796
lymphoma1 / 7175513
non-neoplasia2 / 9725020
normal139 / 336030741
ovarian tumor1 / 7668213
pancreatic tumor7 / 10461666
primitive neuroectodermal tumor of the CNS8 / 12568063
prostate cancer9 / 10268087
retinoblastoma4 / 4635686
skin tumor6 / 12494948
soft tissue/muscle tissue tumor5 / 12519139
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland3 / 3319790
ascites8 / 40015199
bladder2 / 2975767
blood2 / 12347816
bone8 / 71655111
bone marrow1 / 4880120
brain35 / 110098931
cervix4 / 4817183
connective tissue4 / 14925526
ear0 / 162120 
embryonic tissue16 / 21572274
esophagus0 / 202090 
eye11 / 21105452
heart6 / 8962666
intestine14 / 23447259
kidney15 / 21177770
larynx2 / 2414582
liver11 / 20774352
lung24 / 33697471
lymph1 / 4427022
lymph node6 / 9161065
mammary gland3 / 15327119
mouth0 / 670520 
muscle4 / 10771537
nerve1 / 1576863
ovary2 / 10205119
pancreas11 / 21481251
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta11 / 28082539
prostate13 / 18934568
salivary gland2 / 2015599
skin7 / 21057433
spleen0 / 539520 
stomach16 / 96619165
testis5 / 33044215
thymus3 / 8113136
thyroid1 / 4747321
tonsil3 / 16999176
trachea0 / 524130 
umbilical cord2 / 13680146
uterus16 / 23287868
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 211595_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts227.35
Adipocyte78.4
AdrenalCortex71.65
Adrenalgland66.7
Amygdala75.6
Appendix54.4
AtrioventricularNode48.9
BDCA4+_DentriticCells98.75
Bonemarrow65.4
BronchialEpithelialCells84.45
CD105+_Endothelial182.95
CD14+_Monocytes112.05
CD19+_BCells(neg._sel.)95.85
CD33+_Myeloid94.35
CD34+124.15
CD4+_Tcells73.95
CD56+_NKCells84.2
CD71+_EarlyErythroid78.7
CD8+_Tcells62.1
CardiacMyocytes137.65
Caudatenucleus59.7
Cerebellum54.25
CerebellumPeduncles77
CiliaryGanglion45.3
CingulateCortex65.5
Colorectaladenocarcinoma78.85
DorsalRootGanglion51.6
FetalThyroid76.6
Fetalbrain67.3
Fetalliver57
Fetallung42.6
GlobusPallidus48.25
Heart246.6
Hypothalamus74.2
Kidney54.65
Leukemia_chronicMyelogenousK-56260.35
Leukemia_promyelocytic-HL-6093.65
Leukemialymphoblastic(MOLT-4)58.2
Liver201.6
Lung109.95
Lymphnode58.3
Lymphoma_burkitts(Daudi)126.85
Lymphoma_burkitts(Raji)139.7
MedullaOblongata61.6
OccipitalLobe58.1
OlfactoryBulb52.75
Ovary44.45
Pancreas52.55
PancreaticIslet71.05
ParietalLobe68.4
Pituitary78.5
Placenta70.2
Pons52.3
PrefrontalCortex76.3
Prostate105.5
Salivarygland50.55
SkeletalMuscle76.3
Skin49.55
SmoothMuscle76.6
Spinalcord57.4
SubthalamicNucleus41.4
SuperiorCervicalGanglion68.55
TemporalLobe56.75
Testis92.3
TestisGermCell64.5
TestisIntersitial54.9
TestisLeydigCell67.45
TestisSeminiferousTubule63.2
Thalamus68.25
Thymus77.45
Thyroid105.7
Tongue58.15
Tonsil65.3
Trachea62.8
TrigeminalGanglion47.2
Uterus58.1
UterusCorpus58.45
WholeBlood64.55
Wholebrain139.6
colon67.85
pineal_day83.22
pineal_night78.42
retina81.075
small_intestine65.3
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P935318
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.57 ± 0.39
Basal Forebrain5.11 ± 0.55
Basal Part of Pons5.66 ± 0.28
Cerebellar Cortex5.47 ± 0.41
Cerebellar Nuclei5.63 ± 0.27
Claustrum5.2 ± 0.96
Epithalamus5.1 ± 0.5
Frontal Lobe5.67 ± 0.39
Globus Pallidus5.27 ± 0.25
Hypothalamus5.27 ± 0.83
Insula5.6 ± 0.33
Limbic Lobe5.45 ± 0.47
Mesencephalon5.51 ± 0.41
Myelencephalon5.38 ± 0.53
Occipital Lobe4.87 ± 0.48
Parietal Lobe5.32 ± 0.38
Pontine Tegmentum5.39 ± 0.61
Striatum5.06 ± 0.39
Subthalamus5.5 ± 0.65
Temporal Lobe5.55 ± 0.47
Thalamus5.2 ± 0.52
White Matter5.07 ± 0.36
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Mrps11CBCerebellum2.11
2.99
Mrps11CTXCerebral cortex4.34
6.2
Mrps11HIPHippocampal region0.52
1.62
Mrps11HPFHippocampal formation0.58
1.63
Mrps11HYHypothalamus0.37
0.73
Mrps11LSXLateral septal complex4.76
5.91
Mrps11MBMidbrain2.78
4.34
Mrps11MYMedulla1.06
2.21
Mrps11OLFOlfactory bulb2.29
1.98
Mrps11PPons1.01
1.91
Mrps11PALPallidum0.46
0.66
Mrps11RHPRetrohippocampal region0.72
1.78
Mrps11sAMYStriatum-like amygdalar nuclei0.13
0.08
Mrps11STRStriatum0.63
0.68
Mrps11STRdStriatum dorsal region0.11
0.08
Mrps11STRvStriatum ventral region0.45
0.32
Mrps11THThalamus3.46
4.8
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00000698 29 90 118 ASHNNTQIQVVSASNEPLAFASCGTEGFR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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