Annotation Detail for FUNDC2
Basic Information Top
| Gene Symbol: | FUNDC2 ( DC44,FLJ33773,HCBP6,HCC3,MGC131676,MGC2495,PD03104 ) |
|---|---|
| Gene Full Name: | FUN14 domain containing 2 |
| Band: | Xq28 |
| Quick Links | Entrez ID:65991; OMIM: NA; Uniprot ID:FUND2_HUMAN; ENSEMBL ID: ENSG00000165775; HGNC ID: 24925 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.356050
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 29 / 564012 | 51 |  |
| neonate | 4 / 31097 | 128 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 107 / 1939121 | 55 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 13 / 94178 | 138 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 10 / 263845 | 37 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 6 / 71755 | 83 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 187 / 3360307 | 55 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 7 / 104616 | 66 | |
| primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 5 / 46356 | 107 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 6 / 48801 | 122 | |
| brain | 57 / 1100989 | 51 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 23 / 211054 | 108 | |
| heart | 10 / 89626 | 111 | |
| intestine | 10 / 234472 | 42 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 2 / 24145 | 82 | |
| liver | 6 / 207743 | 28 | |
| lung | 16 / 336974 | 47 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 14 / 153271 | 91 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 24 / 107715 | 222 |  |
| nerve | 2 / 15768 | 126 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 21 / 214812 | 97 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 14 / 280825 | 49 | |
| prostate | 12 / 189345 | 63 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 5 / 210574 | 23 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 3 / 96619 | 31 | |
| testis | 10 / 330442 | 30 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 4 / 13680 | 292 | |
| uterus | 11 / 232878 | 47 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_23_P171314
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.25 ± 0.23 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.35 ± 0.32 | |
| Basal Part of Pons | 7.62 ± 0.25 | |
| Cerebellar Cortex | 7.55 ± 0.28 | |
| Cerebellar Nuclei | 7.91 ± 0.32 | |
| Claustrum | 7.19 ± 0.34 | |
| Epithalamus | 7.28 ± 0.39 | |
| Frontal Lobe | 7.44 ± 0.29 | |
| Globus Pallidus | 7.92 ± 0.27 | |
| Hypothalamus | 7.45 ± 0.32 | |
| Insula | 7.19 ± 0.25 | |
| Limbic Lobe | 7.29 ± 0.29 | |
| Mesencephalon | 7.53 ± 0.42 | |
| Myelencephalon | 7.4 ± 0.32 | |
| Occipital Lobe | 7.28 ± 0.32 | |
| Parietal Lobe | 7.41 ± 0.33 | |
| Pontine Tegmentum | 7.46 ± 0.27 | |
| Striatum | 7.5 ± 0.34 | |
| Subthalamus | 7.65 ± 0.11 | |
| Temporal Lobe | 7.34 ± 0.28 | |
| Thalamus | 7.36 ± 0.26 | |
| White Matter | 7.53 ± 0.35 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 1700034I23Rik | CB | Cerebellum | 0 | |
| 0 | | |||
| 1700034I23Rik | CTX | Cerebral cortex | 0 | |
| 0 | | |||
| 1700034I23Rik | HIP | Hippocampal region | 0 | |
| 0 | | |||
| 1700034I23Rik | HPF | Hippocampal formation | 0 | |
| 0 | | |||
| 1700034I23Rik | HY | Hypothalamus | 0 | |
| 0 | | |||
| 1700034I23Rik | LSX | Lateral septal complex | 0 | |
| 0 | | |||
| 1700034I23Rik | MB | Midbrain | 0 | |
| 0 | | |||
| 1700034I23Rik | MY | Medulla | 0 | |
| 0 | | |||
| 1700034I23Rik | OLF | Olfactory bulb | 0 | |
| 0 | | |||
| 1700034I23Rik | P | Pons | 0 | |
| 0 | | |||
| 1700034I23Rik | PAL | Pallidum | 0 | |
| 0 | | |||
| 1700034I23Rik | RHP | Retrohippocampal region | 0 | |
| 0 | | |||
| 1700034I23Rik | sAMY | Striatum-like amygdalar nuclei | 0 | |
| 0 | | |||
| 1700034I23Rik | STR | Striatum | 0 | |
| 0 | | |||
| 1700034I23Rik | STRd | Striatum dorsal region | 0 | |
| 0 | | |||
| 1700034I23Rik | STRv | Striatum ventral region | 0 | |
| 0 | | |||
| 1700034I23Rik | TH | Thalamus | 0 | |
| 0 | |