Annotation Detail for TMEM108
Basic Information Top
| Gene Symbol: | TMEM108 ( CT124,MGC3040 ) |
|---|---|
| Gene Full Name: | transmembrane protein 108 |
| Band: | 3q22.1 |
| Quick Links | Entrez ID:66000; OMIM: NA; Uniprot ID:TM108_HUMAN; ENSEMBL ID: ENSG00000144868; HGNC ID: 28451 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.191616
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 29 / 564012 | 51 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 14 / 1939121 | 7 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 2 / 136302 | 14 |  |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 64 / 3360307 | 19 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 21 / 125680 | 167 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 45 / 1100989 | 40 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 9 / 211054 | 42 | |
| heart | 2 / 89626 | 22 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 28 / 336974 | 83 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 14 / 330442 | 42 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P71781
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.08 ± 0.47 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.85 ± 0.37 | |
| Basal Part of Pons | 5.4 ± 0.41 | |
| Cerebellar Cortex | 6.4 ± 0.18 | |
| Cerebellar Nuclei | 5.36 ± 0.48 | |
| Claustrum | 5.42 ± 0.49 | |
| Epithalamus | 5.99 ± 0.55 | |
| Frontal Lobe | 6.29 ± 0.44 | |
| Globus Pallidus | 5.25 ± 0.24 | |
| Hypothalamus | 5.9 ± 0.82 | |
| Insula | 6.43 ± 0.21 | |
| Limbic Lobe | 6.03 ± 0.68 | |
| Mesencephalon | 5.93 ± 0.59 | |
| Myelencephalon | 5.92 ± 0.84 | |
| Occipital Lobe | 5.34 ± 0.88 | |
| Parietal Lobe | 6.11 ± 0.47 | |
| Pontine Tegmentum | 6.3 ± 0.86 | |
| Striatum | 4.36 ± 0.91 | |
| Subthalamus | 5.09 ± 0.61 | |
| Temporal Lobe | 6.36 ± 0.35 | |
| Thalamus | 6.59 ± 0.61 | |
| White Matter | 3.6 ± 0.55 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Tmem108 | CB | Cerebellum | 88.69 | |
| 100 | | |||
| Tmem108 | CTX | Cerebral cortex | 81.02 | |
| 71.4 | | |||
| Tmem108 | HIP | Hippocampal region | 86.02 | |
| 100 | | |||
| Tmem108 | HPF | Hippocampal formation | 80.02 | |
| 95.51 | | |||
| Tmem108 | HY | Hypothalamus | 44.1 | |
| 38.96 | | |||
| Tmem108 | LSX | Lateral septal complex | 23.7 | |
| 19.03 | | |||
| Tmem108 | MB | Midbrain | 47.76 | |
| 48.32 | | |||
| Tmem108 | MY | Medulla | 40.58 | |
| 51.51 | | |||
| Tmem108 | OLF | Olfactory bulb | 78.66 | |
| 79.16 | | |||
| Tmem108 | P | Pons | 42.62 | |
| 48.55 | | |||
| Tmem108 | PAL | Pallidum | 26.48 | |
| 24.73 | | |||
| Tmem108 | RHP | Retrohippocampal region | 70.89 | |
| 68.83 | | |||
| Tmem108 | sAMY | Striatum-like amygdalar nuclei | 41.74 | |
| 33.96 | | |||
| Tmem108 | STR | Striatum | 21.46 | |
| 17.63 | | |||
| Tmem108 | STRd | Striatum dorsal region | 17.03 | |
| 14.27 | | |||
| Tmem108 | STRv | Striatum ventral region | 23.51 | |
| 17.84 | | |||
| Tmem108 | TH | Thalamus | 71.52 | |
| 69.46 | |