AutismKB 2.0

Annotation Detail for SOLH


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Basic Information Top
Gene Symbol:SOLH ( CAPN15,MGC131491 )
Gene Full Name: small optic lobes homolog (Drosophila)
Band: 16p13.3
Quick LinksEntrez ID:6650; OMIM: 603267; Uniprot ID:CAN15_HUMAN; ENSEMBL ID: ENSG00000103326; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst7 / 62319112
fetus12 / 56401221
neonate0 / 310970 
infant2 / 2362084
juvenile0 / 555560 
adult53 / 193912127
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor3 / 9417831
cervical tumor1 / 3436629
chondrosarcoma2 / 8282324
colorectal tumor5 / 11424643
esophageal tumor0 / 172900 
gastrointestinal tumor11 / 11936992
germ cell tumor7 / 26384526
glioma10 / 10688393
head and neck tumor7 / 13630251
kidney tumor2 / 6895929
leukemia11 / 95842114
liver tumor1 / 9635910
lung tumor12 / 103127116
lymphoma4 / 7175555
non-neoplasia3 / 9725030
normal72 / 336030721
ovarian tumor0 / 766820 
pancreatic tumor7 / 10461666
primitive neuroectodermal tumor of the CNS5 / 12568039
prostate cancer5 / 10268048
retinoblastoma0 / 463560 
skin tumor32 / 124949256
soft tissue/muscle tissue tumor9 / 12519171
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites8 / 40015199
bladder0 / 297570 
blood4 / 12347832
bone3 / 7165541
bone marrow5 / 48801102
brain21 / 110098919
cervix2 / 4817141
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue17 / 21572278
esophagus0 / 202090 
eye3 / 21105414
heart0 / 896260 
intestine10 / 23447242
kidney6 / 21177728
larynx0 / 241450 
liver3 / 20774314
lung18 / 33697453
lymph3 / 4427067
lymph node10 / 91610109
mammary gland3 / 15327119
mouth1 / 6705214
muscle4 / 10771537
nerve0 / 157680 
ovary1 / 1020519
pancreas14 / 21481265
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate5 / 18934526
salivary gland5 / 20155248
skin34 / 210574161
spleen2 / 5395237
stomach2 / 9661920
testis6 / 33044218
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus7 / 23287830
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204275_at
Cell line Expression level Expression bar
721_B_lymphoblasts52.95
Adipocyte10
AdrenalCortex13.6
Adrenalgland10
Amygdala9.75
Appendix12.85
AtrioventricularNode10.7
BDCA4+_DentriticCells108.9
Bonemarrow12
BronchialEpithelialCells11.15
CD105+_Endothelial37.65
CD14+_Monocytes30
CD19+_BCells(neg._sel.)27.8
CD33+_Myeloid17.65
CD34+35.95
CD4+_Tcells31
CD56+_NKCells207.5
CD71+_EarlyErythroid18.05
CD8+_Tcells28.6
CardiacMyocytes15.5
Caudatenucleus9.3
Cerebellum13.1
CerebellumPeduncles13.05
CiliaryGanglion9.8
CingulateCortex9.8
Colorectaladenocarcinoma58.5
DorsalRootGanglion10
FetalThyroid11.55
Fetalbrain10.4
Fetalliver13.95
Fetallung9.55
GlobusPallidus8.85
Heart17.2
Hypothalamus8.75
Kidney10.35
Leukemia_chronicMyelogenousK-56229.6
Leukemia_promyelocytic-HL-6034.85
Leukemialymphoblastic(MOLT-4)15.1
Liver16.8
Lung28.15
Lymphnode21.1
Lymphoma_burkitts(Daudi)14.8
Lymphoma_burkitts(Raji)99.45
MedullaOblongata9.8
OccipitalLobe8
OlfactoryBulb11.05
Ovary8
Pancreas10.55
PancreaticIslet10.65
ParietalLobe10.55
Pituitary10.05
Placenta10.75
Pons10.45
PrefrontalCortex15.95
Prostate18.35
Salivarygland7.5
SkeletalMuscle15.8
Skin9.3
SmoothMuscle10.1
Spinalcord10.85
SubthalamicNucleus13.35
SuperiorCervicalGanglion15.7
TemporalLobe9.95
Testis20.75
TestisGermCell12.4
TestisIntersitial10.35
TestisLeydigCell11.5
TestisSeminiferousTubule11.8
Thalamus9.4
Thymus21.4
Thyroid16.2
Tongue11.8
Tonsil14.95
Trachea8.75
TrigeminalGanglion11.3
Uterus9.9
UterusCorpus11.35
WholeBlood13.25
Wholebrain8.45
colon10.45
pineal_day11.62
pineal_night10.34
retina11.625
small_intestine9.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P118113
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.17 ± 1.06
Basal Forebrain1.6 ± 0.33
Basal Part of Pons1.25 ± 0.46
Cerebellar Cortex2.36 ± 0.31
Cerebellar Nuclei1.82 ± 0.79
Claustrum2.51 ± 0.89
Epithalamus1.5 ± 0.74
Frontal Lobe1.34 ± 0.65
Globus Pallidus1.56 ± 0.61
Hypothalamus1.71 ± 0.88
Insula1.24 ± 0.39
Limbic Lobe1.49 ± 0.66
Mesencephalon1.76 ± 0.78
Myelencephalon1.62 ± 0.7
Occipital Lobe1.84 ± 0.75
Parietal Lobe1.67 ± 0.75
Pontine Tegmentum1.6 ± 0.71
Striatum1.51 ± 0.88
Subthalamus1.57 ± 0.64
Temporal Lobe1.54 ± 0.8
Thalamus1.5 ± 0.63
White Matter1.99 ± 0.82
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
SolhCBCerebellum40.88
63.26
SolhCTXCerebral cortex72.99
53.71
SolhHIPHippocampal region49.28
66.38
SolhHPFHippocampal formation52.03
57.09
SolhHYHypothalamus33.5
26.85
SolhLSXLateral septal complex32.91
22.62
SolhMBMidbrain35.57
32.08
SolhMYMedulla34.98
34.59
SolhOLFOlfactory bulb58.9
45.98
SolhPPons33.01
33.46
SolhPALPallidum27.33
23.03
SolhRHPRetrohippocampal region57.15
46.19
SolhsAMYStriatum-like amygdalar nuclei41.43
29.67
SolhSTRStriatum33.99
24
SolhSTRdStriatum dorsal region32.83
23.65
SolhSTRvStriatum ventral region35.87
23.63
SolhTHThalamus42.85
36.75
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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