Annotation Detail for SSX4
Basic Information Top
| Gene Symbol: | SSX4 ( CT5.4,MGC119056,MGC12411,SSX4B ) |
|---|---|
| Gene Full Name: | synovial sarcoma, X breakpoint 4 |
| Band: | Xp11.23 |
| Quick Links | Entrez ID:6759; OMIM: 300326; Uniprot ID:SSX4_HUMAN; ENSEMBL ID: ENSG00000204645; HGNC ID: 11338 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 211425_x_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 12.65 |  |
| Adipocyte | 2.55 |  |
| AdrenalCortex | 2.55 | |
| Adrenalgland | 2.15 | |
| Amygdala | 2.75 | |
| Appendix | 2.6 | |
| AtrioventricularNode | 1.95 | |
| BDCA4+_DentriticCells | 2.9 | |
| Bonemarrow | 2.55 | |
| BronchialEpithelialCells | 2.55 | |
| CD105+_Endothelial | 2.6 | |
| CD14+_Monocytes | 2.8 | |
| CD19+_BCells(neg._sel.) | 2.75 | |
| CD33+_Myeloid | 3.35 | |
| CD34+ | 3.3 | |
| CD4+_Tcells | 2.8 | |
| CD56+_NKCells | 3.1 | |
| CD71+_EarlyErythroid | 2.4 | |
| CD8+_Tcells | 2.5 | |
| CardiacMyocytes | 3.15 | |
| Caudatenucleus | 2.3 | |
| Cerebellum | 2.05 | |
| CerebellumPeduncles | 2.9 | |
| CiliaryGanglion | 1.75 | |
| CingulateCortex | 2.6 | |
| Colorectaladenocarcinoma | 2.55 | |
| DorsalRootGanglion | 1.9 | |
| FetalThyroid | 2.45 | |
| Fetalbrain | 2.55 | |
| Fetalliver | 2.2 | |
| Fetallung | 2.15 | |
| GlobusPallidus | 1.85 | |
| Heart | 3.2 | |
| Hypothalamus | 2.8 | |
| Kidney | 2 | |
| Leukemia_chronicMyelogenousK-562 | 2.35 | |
| Leukemia_promyelocytic-HL-60 | 2.25 | |
| Leukemialymphoblastic(MOLT-4) | 2.1 | |
| Liver | 3.35 | |
| Lung | 2.9 | |
| Lymphnode | 2.25 | |
| Lymphoma_burkitts(Daudi) | 3.25 | |
| Lymphoma_burkitts(Raji) | 3.5 | |
| MedullaOblongata | 2.4 | |
| OccipitalLobe | 2.3 | |
| OlfactoryBulb | 2 | |
| Ovary | 1.7 | |
| Pancreas | 2.05 | |
| PancreaticIslet | 2.7 | |
| ParietalLobe | 2.7 | |
| Pituitary | 3.05 | |
| Placenta | 2.7 | |
| Pons | 2.45 | |
| PrefrontalCortex | 3.25 | |
| Prostate | 3.05 | |
| Salivarygland | 2.1 | |
| SkeletalMuscle | 2.95 | |
| Skin | 1.9 | |
| SmoothMuscle | 2.95 | |
| Spinalcord | 2.75 | |
| SubthalamicNucleus | 2.3 | |
| SuperiorCervicalGanglion | 2.9 | |
| TemporalLobe | 2.35 | |
| Testis | 2.35 | |
| TestisGermCell | 2.75 | |
| TestisIntersitial | 2.35 | |
| TestisLeydigCell | 2.55 | |
| TestisSeminiferousTubule | 2.7 | |
| Thalamus | 2.6 | |
| Thymus | 2.05 | |
| Thyroid | 3.25 | |
| Tongue | 2.45 | |
| Tonsil | 2.5 | |
| Trachea | 2.15 | |
| TrigeminalGanglion | 2.6 | |
| Uterus | 2.1 | |
| UterusCorpus | 2.35 | |
| WholeBlood | 2.85 | |
| Wholebrain | 2.2 | |
| colon | 2.6 | |
| pineal_day | 3.24 | |
| pineal_night | 3.16 | |
| retina | 3.1 | |
| small_intestine | 2.5 | |
- Probe name: A_23_P33881
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 1.9 ± 1 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.54 ± 0.23 | |
| Basal Part of Pons | 1.25 ± 0.4 | |
| Cerebellar Cortex | 1.29 ± 0.66 | |
| Cerebellar Nuclei | 1.74 ± 0.71 | |
| Claustrum | 2.34 ± 0.85 | |
| Epithalamus | 1.19 ± 0.7 | |
| Frontal Lobe | 1.35 ± 0.71 | |
| Globus Pallidus | 2.09 ± 0.36 | |
| Hypothalamus | 1.59 ± 0.66 | |
| Insula | 1.36 ± 0.49 | |
| Limbic Lobe | 1.47 ± 0.6 | |
| Mesencephalon | 1.65 ± 0.68 | |
| Myelencephalon | 1.48 ± 0.63 | |
| Occipital Lobe | 1.48 ± 0.55 | |
| Parietal Lobe | 1.47 ± 0.69 | |
| Pontine Tegmentum | 1.5 ± 0.65 | |
| Striatum | 1.64 ± 0.51 | |
| Subthalamus | 1.58 ± 0.58 | |
| Temporal Lobe | 1.34 ± 0.53 | |
| Thalamus | 1.43 ± 0.56 | |
| White Matter | 1.99 ± 0.3 | |
Mouse Brain ISH 