AutismKB 2.0

Annotation Detail for ST13


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Basic Information Top
Gene Symbol:ST13 ( AAG2,FAM10A1,FAM10A4,FLJ27260,HIP,HOP,HSPABP,HSPABP1,MGC129952,P48,PRO0786,SNC6 )
Gene Full Name: suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
Band: 22q13.2
Quick LinksEntrez ID:6767; OMIM: 606796; Uniprot ID:F10A1_HUMAN; ENSEMBL ID: ENSG00000100380; HGNC ID: 11343
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body17 / 70761240
blastocyst20 / 62319320
fetus126 / 564012223
neonate8 / 31097257
infant10 / 23620423
juvenile8 / 55556143
adult666 / 1939121343
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma5 / 17475286
breast (mammary gland) tumor15 / 94178159
cervical tumor7 / 34366203
chondrosarcoma6 / 8282372
colorectal tumor10 / 11424687
esophageal tumor3 / 17290173
gastrointestinal tumor9 / 11936975
germ cell tumor56 / 263845212
glioma9 / 10688384
head and neck tumor64 / 136302469
kidney tumor15 / 68959217
leukemia7 / 9584273
liver tumor19 / 96359197
lung tumor2 / 10312719
lymphoma5 / 7175569
non-neoplasia12 / 97250123
normal654 / 3360307194
ovarian tumor5 / 7668265
pancreatic tumor14 / 104616133
primitive neuroectodermal tumor of the CNS49 / 125680389
prostate cancer23 / 102680223
retinoblastoma8 / 46356172
skin tumor40 / 124949320
soft tissue/muscle tissue tumor344 / 1251912747
uterine tumor17 / 90257188
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland5 / 33197150
ascites1 / 4001524
bladder4 / 29757134
blood12 / 12347897
bone14 / 71655195
bone marrow5 / 48801102
brain276 / 1100989250
cervix8 / 48171166
connective tissue12 / 14925580
ear5 / 16212308
embryonic tissue65 / 215722301
esophagus3 / 20209148
eye32 / 211054151
heart12 / 89626133
intestine30 / 234472127
kidney36 / 211777169
larynx30 / 241451242
liver31 / 207743149
lung32 / 33697494
lymph2 / 4427045
lymph node4 / 9161043
mammary gland23 / 153271150
mouth22 / 67052328
muscle14 / 107715129
nerve0 / 157680 
ovary12 / 102051117
pancreas31 / 214812144
parathyroid4 / 20539194
pharynx3 / 4132872
pituitary gland9 / 16585542
placenta49 / 280825174
prostate35 / 189345184
salivary gland4 / 20155198
skin56 / 210574265
spleen10 / 53952185
stomach10 / 96619103
testis82 / 330442248
thymus25 / 81131308
thyroid20 / 47473421
tonsil0 / 169990 
trachea13 / 52413248
umbilical cord0 / 136800 
uterus61 / 232878261
vascular21 / 51780405
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 208667_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts281.3
Adipocyte101.6
AdrenalCortex55.6
Adrenalgland143.8
Amygdala378.3
Appendix95.6
AtrioventricularNode38.35
BDCA4+_DentriticCells182.5
Bonemarrow22.85
BronchialEpithelialCells136.15
CD105+_Endothelial486.4
CD14+_Monocytes55.35
CD19+_BCells(neg._sel.)164.15
CD33+_Myeloid118.65
CD34+498.35
CD4+_Tcells122.75
CD56+_NKCells267.1
CD71+_EarlyErythroid264.7
CD8+_Tcells148
CardiacMyocytes28.95
Caudatenucleus159.1
Cerebellum115.15
CerebellumPeduncles151.8
CiliaryGanglion17.7
CingulateCortex89.05
Colorectaladenocarcinoma106.9
DorsalRootGanglion23.35
FetalThyroid47.05
Fetalbrain172.2
Fetalliver240.05
Fetallung133.1
GlobusPallidus77.05
Heart12.2
Hypothalamus461.8
Kidney118.45
Leukemia_chronicMyelogenousK-562121.1
Leukemia_promyelocytic-HL-6038.75
Leukemialymphoblastic(MOLT-4)129.7
Liver20.1
Lung30.95
Lymphnode86.45
Lymphoma_burkitts(Daudi)111.45
Lymphoma_burkitts(Raji)78.8
MedullaOblongata144.7
OccipitalLobe222.3
OlfactoryBulb202
Ovary155.3
Pancreas56.6
PancreaticIslet182.15
ParietalLobe168.4
Pituitary318.45
Placenta162.7
Pons84.15
PrefrontalCortex284.1
Prostate249.05
Salivarygland110
SkeletalMuscle31.35
Skin15.85
SmoothMuscle96.85
Spinalcord473.3
SubthalamicNucleus39.05
SuperiorCervicalGanglion21.75
TemporalLobe52.25
Testis36.8
TestisGermCell129.15
TestisIntersitial32.1
TestisLeydigCell27.9
TestisSeminiferousTubule46.3
Thalamus190.55
Thymus68.75
Thyroid426.25
Tongue26
Tonsil21.8
Trachea121.65
TrigeminalGanglion19.8
Uterus352.95
UterusCorpus137.3
WholeBlood40.5
Wholebrain183.75
colon119.7
pineal_day461.98
pineal_night483.66
retina467.825
small_intestine140
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_2497_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.34 ± 0.36
Basal Forebrain7.38 ± 0.31
Basal Part of Pons7.29 ± 0.28
Cerebellar Cortex7.08 ± 0.31
Cerebellar Nuclei7.64 ± 0.3
Claustrum7.43 ± 0.31
Epithalamus7.49 ± 0.63
Frontal Lobe7.22 ± 0.34
Globus Pallidus8.13 ± 0.23
Hypothalamus7.24 ± 0.49
Insula7.17 ± 0.24
Limbic Lobe7.27 ± 0.34
Mesencephalon7.39 ± 0.29
Myelencephalon7.3 ± 0.36
Occipital Lobe7.51 ± 0.36
Parietal Lobe7.31 ± 0.39
Pontine Tegmentum7.32 ± 0.34
Striatum7.19 ± 0.38
Subthalamus7.4 ± 0.12
Temporal Lobe7.13 ± 0.39
Thalamus7.31 ± 0.26
White Matter8.21 ± 0.36
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
St13CBCerebellum100
100
St13CTXCerebral cortex100
100
St13HIPHippocampal region100
100
St13HPFHippocampal formation100
100
St13HYHypothalamus100
100
St13LSXLateral septal complex100
100
St13MBMidbrain100
100
St13MYMedulla100
100
St13OLFOlfactory bulb100
100
St13PPons100
100
St13PALPallidum100
100
St13RHPRetrohippocampal region100
100
St13sAMYStriatum-like amygdalar nuclei100
100
St13STRStriatum100
100
St13STRdStriatum dorsal region100
100
St13STRvStriatum ventral region100
100
St13THThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
F10A1_HUMAN_0 0 0 0 AIEINPDSAQPYK PRIDE
F10A1_HUMAN_0 0 0 0 VAAIEALNDGELQK PRIDE
F10A1_HUMAN_118 14 118 131 VAAIEALNDGELQK PRIDE
F10A1_HUMAN_118 15 118 132 KVAAIEALNDGELQK PRIDE
F10A1_HUMAN_118 28 118 145 VAAIEALNDGELQKAIDLFTDAIKLNPR PRIDE
F10A1_HUMAN_132 10 132 141 AIDLFTDAIK PRIDE
F10A1_HUMAN_132 14 132 145 AIDLFTDAIKLNPR PRIDE
F10A1_HUMAN_173 13 173 185 AIEINPDSAQPYK PRIDE
F10A1_HUMAN_173 15 173 187 AIEINPDSAQPYKWR PRIDE
F10A1_HUMAN_18 12 18 29 QDPSVLHTEEMR PRIDE
F10A1_HUMAN_193 29 193 221 LLGHWEEAAHDLALACKLDYDEDASAMLK PRIDE
F10A1_HUMAN_211 12 211 222 LDYDEDASAMLK PRIDE
PAp00005096 17 194 210 LLGHWEEAAHDLALACK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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