Annotation Detail for STAR
Basic Information Top
| Gene Symbol: | STAR ( STARD1 ) |
|---|---|
| Gene Full Name: | steroidogenic acute regulatory protein |
| Band: | 8p11.23 |
| Quick Links | Entrez ID:6770; OMIM: 600617; Uniprot ID:STAR_HUMAN; ENSEMBL ID: ENSG00000147465; HGNC ID: 11359 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.521535
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 14 / 564012 | 24 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 15 / 23620 | 635 |  |
| juvenile | 2 / 55556 | 35 | |
| adult | 268 / 1939121 | 138 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 21 / 12794 | 1641 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 11 / 263845 | 41 | |
| glioma | 1 / 106883 | 9 |  |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 536 / 3360307 | 159 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 8 / 125680 | 63 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 365 / 33197 | 10994 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 91 / 1100989 | 82 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 2 / 211054 | 9 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 4 / 336974 | 11 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 22 / 107715 | 204 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 3 / 20155 | 148 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 66 / 330442 | 199 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 204548_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 6.5 | |
| Adipocyte | 7.95 | |
| AdrenalCortex | 10925.85 | |
| Adrenalgland | 12238.25 | |
| Amygdala | 5.6 | |
| Appendix | 5.85 | |
| AtrioventricularNode | 5.05 | |
| BDCA4+_DentriticCells | 5.6 | |
| Bonemarrow | 5.7 | |
| BronchialEpithelialCells | 5.3 | |
| CD105+_Endothelial | 5.5 | |
| CD14+_Monocytes | 5.8 | |
| CD19+_BCells(neg._sel.) | 5.7 | |
| CD33+_Myeloid | 6.9 | |
| CD34+ | 7.6 | |
| CD4+_Tcells | 5.85 | |
| CD56+_NKCells | 6.35 | |
| CD71+_EarlyErythroid | 5.25 | |
| CD8+_Tcells | 5.15 | |
| CardiacMyocytes | 7.6 | |
| Caudatenucleus | 5.05 | |
| Cerebellum | 4.55 | |
| CerebellumPeduncles | 6.5 | |
| CiliaryGanglion | 4.5 | |
| CingulateCortex | 7.6 | |
| Colorectaladenocarcinoma | 5.5 | |
| DorsalRootGanglion | 4.6 | |
| FetalThyroid | 6.35 | |
| Fetalbrain | 5.4 | |
| Fetalliver | 4.9 | |
| Fetallung | 4.3 | |
| GlobusPallidus | 9.15 | |
| Heart | 7.6 | |
| Hypothalamus | 6.95 | |
| Kidney | 4.7 | |
| Leukemia_chronicMyelogenousK-562 | 59.8 | |
| Leukemia_promyelocytic-HL-60 | 4.9 | |
| Leukemialymphoblastic(MOLT-4) | 4.5 | |
| Liver | 7.7 | |
| Lung | 5.85 | |
| Lymphnode | 9.45 | |
| Lymphoma_burkitts(Daudi) | 7.3 | |
| Lymphoma_burkitts(Raji) | 8.1 | |
| MedullaOblongata | 5.6 | |
| OccipitalLobe | 5.7 | |
| OlfactoryBulb | 4.4 | |
| Ovary | 1068.45 | |
| Pancreas | 4.55 | |
| PancreaticIslet | 5.95 | |
| ParietalLobe | 6.95 | |
| Pituitary | 10.75 | |
| Placenta | 5.5 | |
| Pons | 5.4 | |
| PrefrontalCortex | 6.65 | |
| Prostate | 6.6 | |
| Salivarygland | 4.55 | |
| SkeletalMuscle | 7.25 | |
| Skin | 4.55 | |
| SmoothMuscle | 6.2 | |
| Spinalcord | 5.9 | |
| SubthalamicNucleus | 9.6 | |
| SuperiorCervicalGanglion | 6.75 | |
| TemporalLobe | 5.2 | |
| Testis | 89.6 | |
| TestisGermCell | 178.55 | |
| TestisIntersitial | 94 | |
| TestisLeydigCell | 140.6 | |
| TestisSeminiferousTubule | 50.85 | |
| Thalamus | 12.65 | |
| Thymus | 4.4 | |
| Thyroid | 6.8 | |
| Tongue | 5.8 | |
| Tonsil | 5.9 | |
| Trachea | 4.6 | |
| TrigeminalGanglion | 6.1 | |
| Uterus | 4.35 | |
| UterusCorpus | 5.45 | |
| WholeBlood | 5.7 | |
| Wholebrain | 4.8 | |
| colon | 5.4 | |
| pineal_day | 6.72 | |
| pineal_night | 6.66 | |
| retina | 6.7 | |
| small_intestine | 5.3 | |
- Probe name: CUST_14720_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.81 ± 0.7 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.59 ± 1.12 | |
| Basal Part of Pons | 5.57 ± 0.63 | |
| Cerebellar Cortex | 4.08 ± 0.58 | |
| Cerebellar Nuclei | 5.29 ± 0.52 | |
| Claustrum | 5.94 ± 0.73 | |
| Epithalamus | 4.09 ± 0.98 | |
| Frontal Lobe | 4.97 ± 0.79 | |
| Globus Pallidus | 5.77 ± 0.55 | |
| Hypothalamus | 5.62 ± 0.67 | |
| Insula | 4.93 ± 0.5 | |
| Limbic Lobe | 4.7 ± 0.75 | |
| Mesencephalon | 5.39 ± 0.87 | |
| Myelencephalon | 4.99 ± 0.8 | |
| Occipital Lobe | 4.8 ± 0.58 | |
| Parietal Lobe | 5.42 ± 0.71 | |
| Pontine Tegmentum | 4.94 ± 0.9 | |
| Striatum | 4.5 ± 1.06 | |
| Subthalamus | 4.95 ± 0.77 | |
| Temporal Lobe | 4.96 ± 0.71 | |
| Thalamus | 5.41 ± 0.8 | |
| White Matter | 2.59 ± 1.1 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Star | CB | Cerebellum | 8.24 | |
| 8.77 | | |||
| Star | CTX | Cerebral cortex | 15.38 | |
| 10.41 | | |||
| Star | HIP | Hippocampal region | 10.86 | |
| 10.29 | | |||
| Star | HPF | Hippocampal formation | 11.97 | |
| 10.89 | | |||
| Star | HY | Hypothalamus | 4.26 | |
| 3.45 | | |||
| Star | LSX | Lateral septal complex | 3.18 | |
| 3.06 | | |||
| Star | MB | Midbrain | 6.58 | |
| 6.05 | | |||
| Star | MY | Medulla | 14.04 | |
| 14.57 | | |||
| Star | OLF | Olfactory bulb | 20.68 | |
| 15.1 | | |||
| Star | P | Pons | 9.31 | |
| 9.61 | | |||
| Star | PAL | Pallidum | 10.96 | |
| 9.52 | | |||
| Star | RHP | Retrohippocampal region | 14.08 | |
| 11.78 | | |||
| Star | sAMY | Striatum-like amygdalar nuclei | 10.1 | |
| 6.09 | | |||
| Star | STR | Striatum | 10.51 | |
| 7.2 | | |||
| Star | STRd | Striatum dorsal region | 8.68 | |
| 5.9 | | |||
| Star | STRv | Striatum ventral region | 20.06 | |
| 13.26 | | |||
| Star | TH | Thalamus | 12.43 | |
| 9.56 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00072693 | 23 | 63 | 85 | LEETLYSDQELAYLQQGEEAMQK | Peptide Atlas |