AutismKB 2.0

Annotation Detail for TLE1


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Basic Information Top
Gene Symbol:TLE1 ( ESG,ESG1,GRG1 )
Gene Full Name: transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)
Band: 9q21.32
Quick LinksEntrez ID:7088; OMIM: 600189; Uniprot ID:TLE1_HUMAN; ENSEMBL ID: ENSG00000196781; HGNC ID: 11837
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst10 / 62319160
fetus57 / 564012101
neonate0 / 310970 
infant2 / 2362084
juvenile1 / 5555617
adult150 / 193912177
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult0 / 19391210 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma8 / 8282396
colorectal tumor9 / 11424678
esophageal tumor0 / 172900 
gastrointestinal tumor87 / 119369728
germ cell tumor26 / 26384598
glioma14 / 106883130
head and neck tumor3 / 13630222
kidney tumor10 / 68959145
leukemia6 / 9584262
liver tumor4 / 9635941
lung tumor10 / 10312796
lymphoma1 / 7175513
non-neoplasia4 / 9725041
normal230 / 336030768
ovarian tumor11 / 76682143
pancreatic tumor7 / 10461666
primitive neuroectodermal tumor of the CNS14 / 125680111
prostate cancer1 / 1026809
retinoblastoma1 / 4635621
skin tumor11 / 12494988
soft tissue/muscle tissue tumor7 / 12519155
uterine tumor12 / 90257132
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal1 / 33603070 
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites75 / 400151874
bladder1 / 2975733
blood6 / 12347848
bone4 / 7165555
bone marrow0 / 488010 
brain49 / 110098944
cervix2 / 4817141
connective tissue9 / 14925560
ear2 / 16212123
embryonic tissue20 / 21572292
esophagus0 / 202090 
eye27 / 211054127
heart16 / 89626178
intestine22 / 23447293
kidney15 / 21177770
larynx0 / 241450 
liver12 / 20774357
lung34 / 336974100
lymph0 / 442700 
lymph node10 / 91610109
mammary gland7 / 15327145
mouth0 / 670520 
muscle6 / 10771555
nerve0 / 157680 
ovary15 / 102051146
pancreas20 / 21481293
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta24 / 28082585
prostate7 / 18934536
salivary gland2 / 2015599
skin27 / 210574128
spleen2 / 5395237
stomach8 / 9661982
testis24 / 33044272
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus17 / 23287872
vascular1 / 5178019
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye1 / 2110544
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203222_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.6
Adipocyte9
AdrenalCortex12.2
Adrenalgland9.4
Amygdala20.9
Appendix9.9
AtrioventricularNode8.1
BDCA4+_DentriticCells10.65
Bonemarrow10.7
BronchialEpithelialCells8.25
CD105+_Endothelial19.4
CD14+_Monocytes9.1
CD19+_BCells(neg._sel.)29.4
CD33+_Myeloid11.4
CD34+13.1
CD4+_Tcells8.05
CD56+_NKCells49.45
CD71+_EarlyErythroid9.65
CD8+_Tcells7.1
CardiacMyocytes18.8
Caudatenucleus8.75
Cerebellum7.55
CerebellumPeduncles11.25
CiliaryGanglion7.3
CingulateCortex12.95
Colorectaladenocarcinoma9.4
DorsalRootGanglion7.35
FetalThyroid9.2
Fetalbrain11.45
Fetalliver8.45
Fetallung8.3
GlobusPallidus7.1
Heart45.5
Hypothalamus8.65
Kidney7.75
Leukemia_chronicMyelogenousK-5627.25
Leukemia_promyelocytic-HL-608
Leukemialymphoblastic(MOLT-4)7.45
Liver18.05
Lung38.25
Lymphnode8.2
Lymphoma_burkitts(Daudi)11.55
Lymphoma_burkitts(Raji)14.3
MedullaOblongata8.1
OccipitalLobe8.8
OlfactoryBulb10.45
Ovary9.3
Pancreas8.7
PancreaticIslet9.45
ParietalLobe10.2
Pituitary10.8
Placenta12.65
Pons9.25
PrefrontalCortex12.3
Prostate11.95
Salivarygland7.95
SkeletalMuscle14.1
Skin8.85
SmoothMuscle11.1
Spinalcord9.85
SubthalamicNucleus8.75
SuperiorCervicalGanglion14.45
TemporalLobe8.5
Testis11.75
TestisGermCell8.25
TestisIntersitial8.4
TestisLeydigCell9.35
TestisSeminiferousTubule8.3
Thalamus9.45
Thymus7.4
Thyroid22.05
Tongue10.85
Tonsil9.35
Trachea7.65
TrigeminalGanglion11.35
Uterus51.55
UterusCorpus8.75
WholeBlood8.9
Wholebrain15.8
colon8.7
pineal_day35.54
pineal_night29
retina12.7
small_intestine7.8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_13994_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.18 ± 0.3
Basal Forebrain7.86 ± 0.12
Basal Part of Pons7.42 ± 0.25
Cerebellar Cortex7.65 ± 0.16
Cerebellar Nuclei7.49 ± 0.22
Claustrum7.3 ± 0.35
Epithalamus7.59 ± 0.28
Frontal Lobe7.7 ± 0.33
Globus Pallidus7.57 ± 0.12
Hypothalamus7.58 ± 0.35
Insula8.09 ± 0.23
Limbic Lobe8.03 ± 0.45
Mesencephalon7.79 ± 0.33
Myelencephalon7.84 ± 0.36
Occipital Lobe7.83 ± 0.37
Parietal Lobe7.91 ± 0.37
Pontine Tegmentum7.89 ± 0.27
Striatum8.44 ± 0.23
Subthalamus8.12 ± 0.31
Temporal Lobe8.1 ± 0.29
Thalamus7.85 ± 0.42
White Matter6.72 ± 0.35
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Tle1CBCerebellum3.92
3.28
Tle1CTXCerebral cortex11.41
8.71
Tle1HIPHippocampal region39.03
40.09
Tle1HPFHippocampal formation32.72
30.85
Tle1HYHypothalamus5.51
3.67
Tle1LSXLateral septal complex5.81
3.27
Tle1MBMidbrain5.97
4.34
Tle1MYMedulla8.26
7.71
Tle1OLFOlfactory bulb10.57
7.15
Tle1PPons7.09
6.29
Tle1PALPallidum4.21
3.42
Tle1RHPRetrohippocampal region21.45
18.96
Tle1sAMYStriatum-like amygdalar nuclei5.58
3.85
Tle1STRStriatum11.29
7.79
Tle1STRdStriatum dorsal region12.96
9.29
Tle1STRvStriatum ventral region10.29
6.43
Tle1THThalamus4.17
2.9
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00028848 14 692 705 YQLHLHESCVLSLK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018