Annotation Detail for TSNAX
Basic Information Top
Gene Symbol: | TSNAX ( DISC1,TRAX ) |
---|---|
Gene Full Name: | translin-associated factor X |
Band: | 1q42.2 |
Quick Links | Entrez ID:7257; OMIM: 602964; Uniprot ID:TSNAX_HUMAN; ENSEMBL ID: ENSG00000116918; HGNC ID: 12380 |
Relate to Another Database: | SFARIGene; denovo-db |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 203983_at
Cell line | Expression level | Expression bar |
---|---|---|
721_B_lymphoblasts | 160.6 | |
Adipocyte | 35.2 | |
AdrenalCortex | 31.45 | |
Adrenalgland | 23.85 | |
Amygdala | 196.4 | |
Appendix | 25 | |
AtrioventricularNode | 17.7 | |
BDCA4+_DentriticCells | 217.45 | |
Bonemarrow | 16.15 | |
BronchialEpithelialCells | 37 | |
CD105+_Endothelial | 209.4 | |
CD14+_Monocytes | 305.15 | |
CD19+_BCells(neg._sel.) | 174.95 | |
CD33+_Myeloid | 389.85 | |
CD34+ | 213.95 | |
CD4+_Tcells | 128.1 | |
CD56+_NKCells | 495.4 | |
CD71+_EarlyErythroid | 160.1 | |
CD8+_Tcells | 145.7 | |
CardiacMyocytes | 36.2 | |
Caudatenucleus | 30.5 | |
Cerebellum | 12.15 | |
CerebellumPeduncles | 21.15 | |
CiliaryGanglion | 13.6 | |
CingulateCortex | 26.85 | |
Colorectaladenocarcinoma | 20.35 | |
DorsalRootGanglion | 16.65 | |
FetalThyroid | 35.1 | |
Fetalbrain | 40.95 | |
Fetalliver | 24.9 | |
Fetallung | 27.1 | |
GlobusPallidus | 18.9 | |
Heart | 19.1 | |
Hypothalamus | 106.35 | |
Kidney | 13.3 | |
Leukemia_chronicMyelogenousK-562 | 46.2 | |
Leukemia_promyelocytic-HL-60 | 21.35 | |
Leukemialymphoblastic(MOLT-4) | 18.95 | |
Liver | 18.3 | |
Lung | 22.65 | |
Lymphnode | 42.9 | |
Lymphoma_burkitts(Daudi) | 22.75 | |
Lymphoma_burkitts(Raji) | 19.25 | |
MedullaOblongata | 31.4 | |
OccipitalLobe | 73.25 | |
OlfactoryBulb | 23.8 | |
Ovary | 11.1 | |
Pancreas | 17 | |
PancreaticIslet | 72.25 | |
ParietalLobe | 33.7 | |
Pituitary | 143.75 | |
Placenta | 26.2 | |
Pons | 14.65 | |
PrefrontalCortex | 89.45 | |
Prostate | 53 | |
Salivarygland | 16.8 | |
SkeletalMuscle | 16.6 | |
Skin | 19.65 | |
SmoothMuscle | 55.1 | |
Spinalcord | 33.8 | |
SubthalamicNucleus | 20.3 | |
SuperiorCervicalGanglion | 39.15 | |
TemporalLobe | 25.75 | |
Testis | 20.35 | |
TestisGermCell | 65.5 | |
TestisIntersitial | 52.65 | |
TestisLeydigCell | 37.95 | |
TestisSeminiferousTubule | 25.95 | |
Thalamus | 37.75 | |
Thymus | 34.2 | |
Thyroid | 176 | |
Tongue | 36.55 | |
Tonsil | 26.75 | |
Trachea | 19.75 | |
TrigeminalGanglion | 20.65 | |
Uterus | 41.75 | |
UterusCorpus | 18.9 | |
WholeBlood | 154.5 | |
Wholebrain | 35.95 | |
colon | 67.1 | |
pineal_day | 343.36 | |
pineal_night | 342.04 | |
retina | 72.475 | |
small_intestine | 67.9 |
Human Whole Brain Microarrayview in Allen Brain Atlas
- Probe name: A_23_P51572
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 8.56 ± 0.32 | |
Basal Forebrain | 8.38 ± 0.18 | |
Basal Part of Pons | 8.6 ± 0.23 | |
Cerebellar Cortex | 8.32 ± 0.22 | |
Cerebellar Nuclei | 8.44 ± 0.22 | |
Claustrum | 8.66 ± 0.33 | |
Epithalamus | 8.56 ± 0.34 | |
Frontal Lobe | 8.49 ± 0.25 | |
Globus Pallidus | 8.33 ± 0.29 | |
Hypothalamus | 8.57 ± 0.16 | |
Insula | 8.53 ± 0.24 | |
Limbic Lobe | 8.64 ± 0.31 | |
Mesencephalon | 8.47 ± 0.26 | |
Myelencephalon | 8.5 ± 0.26 | |
Occipital Lobe | 8.67 ± 0.21 | |
Parietal Lobe | 8.58 ± 0.27 | |
Pontine Tegmentum | 8.54 ± 0.25 | |
Striatum | 8.58 ± 0.27 | |
Subthalamus | 8.73 ± 0.07 | |
Temporal Lobe | 8.54 ± 0.24 | |
Thalamus | 8.51 ± 0.21 | |
White Matter | 8.54 ± 0.41 |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
Tsnax | CB | Cerebellum | 27.82 | |
56.91 | ||||
Tsnax | CTX | Cerebral cortex | 100 | |
100 | ||||
Tsnax | HIP | Hippocampal region | 100 | |
100 | ||||
Tsnax | HPF | Hippocampal formation | 100 | |
100 | ||||
Tsnax | HY | Hypothalamus | 48.25 | |
51.36 | ||||
Tsnax | LSX | Lateral septal complex | 66.28 | |
69.72 | ||||
Tsnax | MB | Midbrain | 42.51 | |
51.18 | ||||
Tsnax | MY | Medulla | 26.58 | |
40.11 | ||||
Tsnax | OLF | Olfactory bulb | 97.41 | |
100 | ||||
Tsnax | P | Pons | 28.78 | |
37.99 | ||||
Tsnax | PAL | Pallidum | 44.8 | |
54.25 | ||||
Tsnax | RHP | Retrohippocampal region | 100 | |
100 | ||||
Tsnax | sAMY | Striatum-like amygdalar nuclei | 91.99 | |
100 | ||||
Tsnax | STR | Striatum | 100 | |
100 | ||||
Tsnax | STRd | Striatum dorsal region | 100 | |
100 | ||||
Tsnax | STRv | Striatum ventral region | 100 | |
100 | ||||
Tsnax | TH | Thalamus | 72.95 | |
86.09 |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
PAp00005502 | 22 | 201 | 222 | MCINSVGNGDIDTPFEVSQFLR | Peptide Atlas |
TSNAX_HUMAN_0 | 0 | 0 | 0 | VTPVDYLLGVADLTGELMR | PRIDE |
TSNAX_HUMAN_100 | 18 | 100 | 117 | IFQVAQELSGEDMHQFHR | PRIDE |
TSNAX_HUMAN_118 | 20 | 118 | 137 | AITTGLQEYVEAVSFQHFIK | PRIDE |
TSNAX_HUMAN_181 | 19 | 181 | 199 | VTPVDYLLGVADLTGELMR | PRIDE |
TSNAX_HUMAN_2 | 10 | 2 | 11 | SNKEGSGGFR | PRIDE |
TSNAX_HUMAN_76 | 22 | 76 | 97 | ITSAPDMEDILTESEIKLDGVR | PRIDE |