AutismKB 2.0

Annotation Detail for TSNAX


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Basic Information Top
Gene Symbol:TSNAX ( DISC1,TRAX )
Gene Full Name: translin-associated factor X
Band: 1q42.2
Quick LinksEntrez ID:7257; OMIM: 602964; Uniprot ID:TSNAX_HUMAN; ENSEMBL ID: ENSG00000116918; HGNC ID: 12380
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203983_at
Cell line Expression level Expression bar
721_B_lymphoblasts160.6
Adipocyte35.2
AdrenalCortex31.45
Adrenalgland23.85
Amygdala196.4
Appendix25
AtrioventricularNode17.7
BDCA4+_DentriticCells217.45
Bonemarrow16.15
BronchialEpithelialCells37
CD105+_Endothelial209.4
CD14+_Monocytes305.15
CD19+_BCells(neg._sel.)174.95
CD33+_Myeloid389.85
CD34+213.95
CD4+_Tcells128.1
CD56+_NKCells495.4
CD71+_EarlyErythroid160.1
CD8+_Tcells145.7
CardiacMyocytes36.2
Caudatenucleus30.5
Cerebellum12.15
CerebellumPeduncles21.15
CiliaryGanglion13.6
CingulateCortex26.85
Colorectaladenocarcinoma20.35
DorsalRootGanglion16.65
FetalThyroid35.1
Fetalbrain40.95
Fetalliver24.9
Fetallung27.1
GlobusPallidus18.9
Heart19.1
Hypothalamus106.35
Kidney13.3
Leukemia_chronicMyelogenousK-56246.2
Leukemia_promyelocytic-HL-6021.35
Leukemialymphoblastic(MOLT-4)18.95
Liver18.3
Lung22.65
Lymphnode42.9
Lymphoma_burkitts(Daudi)22.75
Lymphoma_burkitts(Raji)19.25
MedullaOblongata31.4
OccipitalLobe73.25
OlfactoryBulb23.8
Ovary11.1
Pancreas17
PancreaticIslet72.25
ParietalLobe33.7
Pituitary143.75
Placenta26.2
Pons14.65
PrefrontalCortex89.45
Prostate53
Salivarygland16.8
SkeletalMuscle16.6
Skin19.65
SmoothMuscle55.1
Spinalcord33.8
SubthalamicNucleus20.3
SuperiorCervicalGanglion39.15
TemporalLobe25.75
Testis20.35
TestisGermCell65.5
TestisIntersitial52.65
TestisLeydigCell37.95
TestisSeminiferousTubule25.95
Thalamus37.75
Thymus34.2
Thyroid176
Tongue36.55
Tonsil26.75
Trachea19.75
TrigeminalGanglion20.65
Uterus41.75
UterusCorpus18.9
WholeBlood154.5
Wholebrain35.95
colon67.1
pineal_day343.36
pineal_night342.04
retina72.475
small_intestine67.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P51572
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.56 ± 0.32
Basal Forebrain8.38 ± 0.18
Basal Part of Pons8.6 ± 0.23
Cerebellar Cortex8.32 ± 0.22
Cerebellar Nuclei8.44 ± 0.22
Claustrum8.66 ± 0.33
Epithalamus8.56 ± 0.34
Frontal Lobe8.49 ± 0.25
Globus Pallidus8.33 ± 0.29
Hypothalamus8.57 ± 0.16
Insula8.53 ± 0.24
Limbic Lobe8.64 ± 0.31
Mesencephalon8.47 ± 0.26
Myelencephalon8.5 ± 0.26
Occipital Lobe8.67 ± 0.21
Parietal Lobe8.58 ± 0.27
Pontine Tegmentum8.54 ± 0.25
Striatum8.58 ± 0.27
Subthalamus8.73 ± 0.07
Temporal Lobe8.54 ± 0.24
Thalamus8.51 ± 0.21
White Matter8.54 ± 0.41
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
TsnaxCBCerebellum27.82
56.91
TsnaxCTXCerebral cortex100
100
TsnaxHIPHippocampal region100
100
TsnaxHPFHippocampal formation100
100
TsnaxHYHypothalamus48.25
51.36
TsnaxLSXLateral septal complex66.28
69.72
TsnaxMBMidbrain42.51
51.18
TsnaxMYMedulla26.58
40.11
TsnaxOLFOlfactory bulb97.41
100
TsnaxPPons28.78
37.99
TsnaxPALPallidum44.8
54.25
TsnaxRHPRetrohippocampal region100
100
TsnaxsAMYStriatum-like amygdalar nuclei91.99
100
TsnaxSTRStriatum100
100
TsnaxSTRdStriatum dorsal region100
100
TsnaxSTRvStriatum ventral region100
100
TsnaxTHThalamus72.95
86.09
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00005502 22 201 222 MCINSVGNGDIDTPFEVSQFLR Peptide Atlas
TSNAX_HUMAN_0 0 0 0 VTPVDYLLGVADLTGELMR PRIDE
TSNAX_HUMAN_100 18 100 117 IFQVAQELSGEDMHQFHR PRIDE
TSNAX_HUMAN_118 20 118 137 AITTGLQEYVEAVSFQHFIK PRIDE
TSNAX_HUMAN_181 19 181 199 VTPVDYLLGVADLTGELMR PRIDE
TSNAX_HUMAN_2 10 2 11 SNKEGSGGFR PRIDE
TSNAX_HUMAN_76 22 76 97 ITSAPDMEDILTESEIKLDGVR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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