Annotation Detail for C12orf73
Basic Information Top
| Gene Symbol: | C12orf73 ( DKFZp547P055,FLJ13975 ) |
|---|---|
| Gene Full Name: | chromosome 12 open reading frame 73 |
| Band: | 12q23.3 |
| Quick Links | Entrez ID:728568; OMIM: NA; Uniprot ID:CL073_HUMAN; ENSEMBL ID: ENSG00000204954; HGNC ID: 34450 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.42547
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 16 / 564012 | 28 | |
| neonate | 4 / 31097 | 128 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 26 / 1939121 | 13 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 68 / 3360307 | 20 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 3 / 33197 | 90 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 20 / 1100989 | 18 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 9 / 211054 | 42 | |
| heart | 0 / 89626 | 0 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 4 / 330442 | 12 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 4 / 13680 | 292 |  |
| uterus | 2 / 232878 | 8 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P769672
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.4 ± 0.67 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.51 ± 0.27 | |
| Basal Part of Pons | 7 ± 0.54 | |
| Cerebellar Cortex | 6.89 ± 0.35 | |
| Cerebellar Nuclei | 6.87 ± 0.37 | |
| Claustrum | 6.31 ± 0.73 | |
| Epithalamus | 6.93 ± 0.29 | |
| Frontal Lobe | 6.93 ± 0.4 | |
| Globus Pallidus | 6.27 ± 0.32 | |
| Hypothalamus | 7.45 ± 0.51 | |
| Insula | 7.09 ± 0.41 | |
| Limbic Lobe | 6.47 ± 0.69 | |
| Mesencephalon | 6.66 ± 0.6 | |
| Myelencephalon | 6.67 ± 0.57 | |
| Occipital Lobe | 6.07 ± 0.64 | |
| Parietal Lobe | 6.64 ± 0.48 | |
| Pontine Tegmentum | 6.69 ± 0.53 | |
| Striatum | 6.08 ± 0.5 | |
| Subthalamus | 6.73 ± 1.33 | |
| Temporal Lobe | 6.98 ± 0.45 | |
| Thalamus | 6.69 ± 0.48 | |
| White Matter | 6.79 ± 0.33 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 1810014B01Rik | CB | Cerebellum | 1.65 | |
| 2.3 | | |||
| 1810014B01Rik | CTX | Cerebral cortex | 1.26 | |
| 1.28 | | |||
| 1810014B01Rik | HIP | Hippocampal region | 2.75 | |
| 3.11 | | |||
| 1810014B01Rik | HPF | Hippocampal formation | 2.19 | |
| 2.52 | | |||
| 1810014B01Rik | HY | Hypothalamus | 4.37 | |
| 5.58 | | |||
| 1810014B01Rik | LSX | Lateral septal complex | 0.35 | |
| 0.33 | | |||
| 1810014B01Rik | MB | Midbrain | 0.38 | |
| 0.7 | | |||
| 1810014B01Rik | MY | Medulla | 1.26 | |
| 1.53 | | |||
| 1810014B01Rik | OLF | Olfactory bulb | 1.49 | |
| 1.36 | | |||
| 1810014B01Rik | P | Pons | 0.31 | |
| 0.57 | | |||
| 1810014B01Rik | PAL | Pallidum | 0.27 | |
| 0.55 | | |||
| 1810014B01Rik | RHP | Retrohippocampal region | 1.29 | |
| 1.66 | | |||
| 1810014B01Rik | sAMY | Striatum-like amygdalar nuclei | 0.1 | |
| 0.14 | | |||
| 1810014B01Rik | STR | Striatum | 0.28 | |
| 0.3 | | |||
| 1810014B01Rik | STRd | Striatum dorsal region | 0.29 | |
| 0.33 | | |||
| 1810014B01Rik | STRv | Striatum ventral region | 0.27 | |
| 0.24 | | |||
| 1810014B01Rik | TH | Thalamus | 0.73 | |
| 1 | |