Annotation Detail for LOC729082
Basic Information Top
| Gene Symbol: | LOC729082 ( - ) |
|---|---|
| Gene Full Name: | - |
| Band: | 15q15.1 |
| Quick Links | Entrez ID:729082; OMIM: NA; Uniprot ID:; ENSEMBL ID: ; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.380164
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 10 / 70761 | 141 |  |
| blastocyst | 9 / 62319 | 144 | |
| fetus | 99 / 564012 | 175 | |
| neonate | 1 / 31097 | 32 |  |
| infant | 3 / 23620 | 127 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 166 / 1939121 | 85 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 3 / 12794 | 234 |  |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 4 / 34366 | 116 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 8 / 114246 | 70 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 12 / 119369 | 100 | |
| germ cell tumor | 25 / 263845 | 94 | |
| glioma | 7 / 106883 | 65 | |
| head and neck tumor | 15 / 136302 | 110 | |
| kidney tumor | 9 / 68959 | 130 | |
| leukemia | 17 / 95842 | 177 | |
| liver tumor | 11 / 96359 | 114 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 7 / 71755 | 97 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 423 / 3360307 | 125 | |
| ovarian tumor | 5 / 76682 | 65 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 9 / 125680 | 71 | |
| prostate cancer | 9 / 102680 | 87 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 7 / 124949 | 56 | |
| soft tissue/muscle tissue tumor | 12 / 125191 | 95 | |
| uterine tumor | 7 / 90257 | 77 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 4 / 13106 | 305 | |
| adrenal gland | 4 / 33197 | 120 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 4 / 29757 | 134 | |
| blood | 11 / 123478 | 89 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 19 / 48801 | 389 | |
| brain | 192 / 1100989 | 174 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 28 / 215722 | 129 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 28 / 211054 | 132 | |
| heart | 12 / 89626 | 133 | |
| intestine | 11 / 234472 | 46 | |
| kidney | 38 / 211777 | 179 | |
| larynx | 1 / 24145 | 41 | |
| liver | 25 / 207743 | 120 | |
| lung | 15 / 336974 | 44 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 22 / 91610 | 240 | |
| mammary gland | 9 / 153271 | 58 | |
| mouth | 13 / 67052 | 193 | |
| muscle | 30 / 107715 | 278 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 14 / 214812 | 65 | |
| parathyroid | 6 / 20539 | 292 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 25 / 280825 | 89 | |
| prostate | 15 / 189345 | 79 | |
| salivary gland | 3 / 20155 | 148 | |
| skin | 13 / 210574 | 61 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 7 / 96619 | 72 | |
| testis | 32 / 330442 | 96 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 4 / 16999 | 235 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 21 / 232878 | 90 | |
| vascular | 4 / 51780 | 77 | |
- Probe name: A_24_P655268
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.47 ± 0.34 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.44 ± 0.23 | |
| Basal Part of Pons | 7.04 ± 0.41 | |
| Cerebellar Cortex | 7.11 ± 0.26 | |
| Cerebellar Nuclei | 6.99 ± 0.45 | |
| Claustrum | 6.55 ± 0.5 | |
| Epithalamus | 6.24 ± 0.2 | |
| Frontal Lobe | 6.62 ± 0.38 | |
| Globus Pallidus | 6.16 ± 0.21 | |
| Hypothalamus | 6.08 ± 0.3 | |
| Insula | 6.5 ± 0.3 | |
| Limbic Lobe | 6.57 ± 0.34 | |
| Mesencephalon | 6.56 ± 0.37 | |
| Myelencephalon | 6.61 ± 0.48 | |
| Occipital Lobe | 7.19 ± 0.32 | |
| Parietal Lobe | 6.91 ± 0.32 | |
| Pontine Tegmentum | 6.68 ± 0.42 | |
| Striatum | 6.52 ± 0.37 | |
| Subthalamus | 6.87 ± 0.34 | |
| Temporal Lobe | 6.6 ± 0.44 | |
| Thalamus | 6.9 ± 0.48 | |
| White Matter | 6.08 ± 0.38 | |
Mouse Brain ISH 