Annotation Detail for PLIN4
Basic Information Top
| Gene Symbol: | PLIN4 ( KIAA1881,S3-12 ) |
|---|---|
| Gene Full Name: | perilipin 4 |
| Band: | 19p13.3 |
| Quick Links | Entrez ID:729359; OMIM: 613247; Uniprot ID:PLIN4_HUMAN; ENSEMBL ID: ENSG00000167676; HGNC ID: 29393 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.591387
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 1 / 564012 | 1 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 2 / 23620 | 84 |  |
| juvenile | 1 / 55556 | 17 |  |
| adult | 47 / 1939121 | 24 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 99 / 3360307 | 29 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 17 / 13106 | 1297 |  |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 15 / 1100989 | 13 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 0 / 89626 | 0 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 0 / 336974 | 0 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 24 / 153271 | 156 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 5 / 210574 | 23 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P27846
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.05 ± 0.79 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.81 ± 0.34 | |
| Basal Part of Pons | 3.62 ± 0.39 | |
| Cerebellar Cortex | 3.46 ± 0.37 | |
| Cerebellar Nuclei | 3.94 ± 0.54 | |
| Claustrum | 4.29 ± 0.78 | |
| Epithalamus | 3.37 ± 0.58 | |
| Frontal Lobe | 3.6 ± 0.5 | |
| Globus Pallidus | 4.88 ± 0.47 | |
| Hypothalamus | 3.52 ± 0.51 | |
| Insula | 3.33 ± 0.42 | |
| Limbic Lobe | 3.71 ± 0.68 | |
| Mesencephalon | 3.92 ± 0.64 | |
| Myelencephalon | 3.81 ± 0.66 | |
| Occipital Lobe | 4.06 ± 0.67 | |
| Parietal Lobe | 3.89 ± 0.73 | |
| Pontine Tegmentum | 3.83 ± 0.49 | |
| Striatum | 4.07 ± 0.56 | |
| Subthalamus | 3.8 ± 0.12 | |
| Temporal Lobe | 3.66 ± 0.62 | |
| Thalamus | 3.95 ± 0.47 | |
| White Matter | 4.25 ± 0.14 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| S3-12 | CB | Cerebellum | 28.17 | |
| 39.54 | | |||
| S3-12 | CTX | Cerebral cortex | 47.98 | |
| 37.6 | | |||
| S3-12 | HIP | Hippocampal region | 27.19 | |
| 34.29 | | |||
| S3-12 | HPF | Hippocampal formation | 33.8 | |
| 35.28 | | |||
| S3-12 | HY | Hypothalamus | 21.46 | |
| 18.47 | | |||
| S3-12 | LSX | Lateral septal complex | 6.57 | |
| 4.28 | | |||
| S3-12 | MB | Midbrain | 12.21 | |
| 11.82 | | |||
| S3-12 | MY | Medulla | 23.06 | |
| 23.94 | | |||
| S3-12 | OLF | Olfactory bulb | 46.08 | |
| 40.06 | | |||
| S3-12 | P | Pons | 16.71 | |
| 17.76 | | |||
| S3-12 | PAL | Pallidum | 18.66 | |
| 17.44 | | |||
| S3-12 | RHP | Retrohippocampal region | 44.14 | |
| 36.45 | | |||
| S3-12 | sAMY | Striatum-like amygdalar nuclei | 21.3 | |
| 15.88 | | |||
| S3-12 | STR | Striatum | 26.91 | |
| 20.54 | | |||
| S3-12 | STRd | Striatum dorsal region | 29.93 | |
| 23.41 | | |||
| S3-12 | STRv | Striatum ventral region | 23.53 | |
| 16.65 | | |||
| S3-12 | TH | Thalamus | 23.56 | |
| 21.01 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00133832 | 17 | 1192 | 1208 | AFEHAVSHLQHGQFQAR | Peptide Atlas |