AutismKB 2.0

Annotation Detail for OSGIN2


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Basic Information Top
Gene Symbol:OSGIN2 ( C8orf1,hT41 )
Gene Full Name: oxidative stress induced growth inhibitor family member 2
Band: 8q21.3
Quick LinksEntrez ID:734; OMIM: 604598; Uniprot ID:OSGI2_HUMAN; ENSEMBL ID: ENSG00000164823; HGNC ID: 1355
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus9 / 56401215
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult58 / 193912129
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor3 / 3436687
chondrosarcoma2 / 8282324
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor8 / 11936967
germ cell tumor5 / 26384518
glioma4 / 10688337
head and neck tumor1 / 1363027
kidney tumor2 / 6895929
leukemia5 / 9584252
liver tumor2 / 9635920
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia2 / 9725020
normal76 / 336030722
ovarian tumor5 / 7668265
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer3 / 10268029
retinoblastoma1 / 4635621
skin tumor1 / 1249498
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor6 / 9025766
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites2 / 4001549
bladder0 / 297570 
blood1 / 1234788
bone4 / 7165555
bone marrow5 / 48801102
brain23 / 110098920
cervix3 / 4817162
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus0 / 202090 
eye10 / 21105447
heart0 / 896260 
intestine5 / 23447221
kidney7 / 21177733
larynx0 / 241450 
liver3 / 20774314
lung6 / 33697417
lymph0 / 442700 
lymph node6 / 9161065
mammary gland11 / 15327171
mouth0 / 670520 
muscle7 / 10771564
nerve0 / 157680 
ovary5 / 10205148
pancreas2 / 2148129
parathyroid5 / 20539243
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta1 / 2808253
prostate1 / 1893455
salivary gland0 / 201550 
skin3 / 21057414
spleen0 / 539520 
stomach6 / 9661962
testis13 / 33044239
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus11 / 23287847
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204024_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.1
Adipocyte6.9
AdrenalCortex8.5
Adrenalgland6.4
Amygdala7.95
Appendix9
AtrioventricularNode7.3
BDCA4+_DentriticCells7.15
Bonemarrow8.1
BronchialEpithelialCells6.9
CD105+_Endothelial7.15
CD14+_Monocytes7.55
CD19+_BCells(neg._sel.)7.45
CD33+_Myeloid8.9
CD34+8.85
CD4+_Tcells7.3
CD56+_NKCells8
CD71+_EarlyErythroid6.8
CD8+_Tcells6.5
CardiacMyocytes10.5
Caudatenucleus7.1
Cerebellum5.9
CerebellumPeduncles8.55
CiliaryGanglion5.75
CingulateCortex7.4
Colorectaladenocarcinoma7.1
DorsalRootGanglion6.35
FetalThyroid7.1
Fetalbrain6.9
Fetalliver6.4
Fetallung5.55
GlobusPallidus5.55
Heart10.75
Hypothalamus7.6
Kidney6.2
Leukemia_chronicMyelogenousK-5626.5
Leukemia_promyelocytic-HL-606.3
Leukemialymphoblastic(MOLT-4)5.7
Liver10.35
Lung7.65
Lymphnode6
Lymphoma_burkitts(Daudi)9.7
Lymphoma_burkitts(Raji)10.9
MedullaOblongata6.65
OccipitalLobe6.35
OlfactoryBulb5.55
Ovary5.3
Pancreas5.9
PancreaticIslet7.8
ParietalLobe7.9
Pituitary8.25
Placenta6.95
Pons9.15
PrefrontalCortex8.55
Prostate8.1
Salivarygland6
SkeletalMuscle9.65
Skin7.5
SmoothMuscle8
Spinalcord7.45
SubthalamicNucleus6.8
SuperiorCervicalGanglion11.8
TemporalLobe6.75
Testis6.05
TestisGermCell5.7
TestisIntersitial5.95
TestisLeydigCell7.5
TestisSeminiferousTubule6.05
Thalamus7.35
Thymus5.5
Thyroid8.7
Tongue7.9
Tonsil7.05
Trachea5.85
TrigeminalGanglion9
Uterus7.85
UterusCorpus7.25
WholeBlood7.85
Wholebrain6
colon7.05
pineal_day9.34
pineal_night8.58
retina8.675
small_intestine6.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P82859
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.68 ± 0.62
Basal Forebrain3.42 ± 0.22
Basal Part of Pons3.53 ± 0.54
Cerebellar Cortex3.96 ± 0.32
Cerebellar Nuclei3.56 ± 0.45
Claustrum3.26 ± 0.84
Epithalamus4.23 ± 0.33
Frontal Lobe3.73 ± 0.46
Globus Pallidus3.43 ± 0.61
Hypothalamus3.82 ± 0.59
Insula3.7 ± 0.38
Limbic Lobe3.65 ± 0.59
Mesencephalon3.71 ± 0.55
Myelencephalon3.68 ± 0.53
Occipital Lobe3.66 ± 0.62
Parietal Lobe3.72 ± 0.53
Pontine Tegmentum3.67 ± 0.54
Striatum3.41 ± 0.56
Subthalamus3.49 ± 0.55
Temporal Lobe3.68 ± 0.45
Thalamus3.58 ± 0.51
White Matter2.76 ± 0.56
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
BC010311CBCerebellum0
0
BC010311CTXCerebral cortex0
0
BC010311HIPHippocampal region0
0
BC010311HPFHippocampal formation0
0
BC010311HYHypothalamus0
0
BC010311LSXLateral septal complex0
0
BC010311MBMidbrain0
0
BC010311MYMedulla0
0
BC010311OLFOlfactory bulb0
0
BC010311PPons0
0
BC010311PALPallidum0
0
BC010311RHPRetrohippocampal region0
0
BC010311sAMYStriatum-like amygdalar nuclei0
0
BC010311STRStriatum0
0
BC010311STRdStriatum dorsal region0
0
BC010311STRvStriatum ventral region0
0
BC010311THThalamus0
0
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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