AutismKB 2.0

Annotation Detail for UGP2


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Basic Information Top
Gene Symbol:UGP2 ( UDPG,UDPGP2,UGPP2,pHC379 )
Gene Full Name: UDP-glucose pyrophosphorylase 2
Band: 2p15
Quick LinksEntrez ID:7360; OMIM: 191760; Uniprot ID:UGPA_HUMAN; ENSEMBL ID: ENSG00000169764; HGNC ID: 12527
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst21 / 62319336
fetus82 / 564012145
neonate10 / 31097321
infant3 / 23620127
juvenile21 / 55556377
adult348 / 1939121179
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma5 / 17475286
breast (mammary gland) tumor9 / 9417895
cervical tumor5 / 34366145
chondrosarcoma18 / 82823217
colorectal tumor10 / 11424687
esophageal tumor9 / 17290520
gastrointestinal tumor15 / 119369125
germ cell tumor60 / 263845227
glioma9 / 10688384
head and neck tumor10 / 13630273
kidney tumor17 / 68959246
leukemia13 / 95842135
liver tumor24 / 96359249
lung tumor7 / 10312767
lymphoma13 / 71755181
non-neoplasia24 / 97250246
normal799 / 3360307237
ovarian tumor11 / 76682143
pancreatic tumor6 / 10461657
primitive neuroectodermal tumor of the CNS12 / 12568095
prostate cancer0 / 1026800 
retinoblastoma2 / 4635643
skin tumor17 / 124949136
soft tissue/muscle tissue tumor13 / 125191103
uterine tumor12 / 90257132
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland8 / 33197240
ascites7 / 40015174
bladder8 / 29757268
blood17 / 123478137
bone11 / 71655153
bone marrow8 / 48801163
brain239 / 1100989217
cervix6 / 48171124
connective tissue43 / 149255288
ear2 / 16212123
embryonic tissue56 / 215722259
esophagus9 / 20209445
eye19 / 21105490
heart58 / 89626647
intestine56 / 234472238
kidney47 / 211777221
larynx4 / 24145165
liver76 / 207743365
lung49 / 336974145
lymph4 / 4427090
lymph node6 / 9161065
mammary gland21 / 153271137
mouth10 / 67052149
muscle48 / 107715445
nerve0 / 157680 
ovary20 / 102051195
pancreas17 / 21481279
parathyroid7 / 20539340
pharynx3 / 4132872
pituitary gland2 / 16585120
placenta55 / 280825195
prostate22 / 189345116
salivary gland1 / 2015549
skin41 / 210574194
spleen16 / 53952296
stomach16 / 96619165
testis74 / 330442223
thymus42 / 81131517
thyroid6 / 47473126
tonsil2 / 16999117
trachea18 / 52413343
umbilical cord3 / 13680219
uterus67 / 232878287
vascular16 / 51780308
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205480_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts487.4
Adipocyte605
AdrenalCortex92.6
Adrenalgland76.95
Amygdala602.7
Appendix144.25
AtrioventricularNode71.95
BDCA4+_DentriticCells322.45
Bonemarrow88.25
BronchialEpithelialCells516.6
CD105+_Endothelial101.75
CD14+_Monocytes236.8
CD19+_BCells(neg._sel.)426.3
CD33+_Myeloid345.25
CD34+302.1
CD4+_Tcells432.85
CD56+_NKCells749
CD71+_EarlyErythroid64.95
CD8+_Tcells376.65
CardiacMyocytes281.8
Caudatenucleus432.35
Cerebellum77.05
CerebellumPeduncles157.5
CiliaryGanglion102.05
CingulateCortex500.3
Colorectaladenocarcinoma160.1
DorsalRootGanglion80.1
FetalThyroid194.6
Fetalbrain324.85
Fetalliver186.15
Fetallung254.3
GlobusPallidus355.7
Heart56.55
Hypothalamus541.7
Kidney81.75
Leukemia_chronicMyelogenousK-562122.85
Leukemia_promyelocytic-HL-60199.35
Leukemialymphoblastic(MOLT-4)205.1
Liver67.65
Lung41.7
Lymphnode192.05
Lymphoma_burkitts(Daudi)463.45
Lymphoma_burkitts(Raji)81.4
MedullaOblongata470.1
OccipitalLobe581.7
OlfactoryBulb158.35
Ovary116.35
Pancreas179.8
PancreaticIslet203
ParietalLobe502.9
Pituitary220.15
Placenta244.2
Pons315.4
PrefrontalCortex816.25
Prostate160.65
Salivarygland255.95
SkeletalMuscle358.15
Skin108.7
SmoothMuscle691.8
Spinalcord201.75
SubthalamicNucleus594.75
SuperiorCervicalGanglion89.1
TemporalLobe508.5
Testis64.95
TestisGermCell173.6
TestisIntersitial175.3
TestisLeydigCell107.4
TestisSeminiferousTubule86.05
Thalamus566.75
Thymus125.3
Thyroid302.3
Tongue451.7
Tonsil182.05
Trachea229.2
TrigeminalGanglion41.75
Uterus236
UterusCorpus82.5
WholeBlood372.5
Wholebrain347.45
colon634.45
pineal_day378.54
pineal_night359
retina168.125
small_intestine188.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P148199
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.56 ± 0.77
Basal Forebrain3.02 ± 0.35
Basal Part of Pons3.84 ± 0.62
Cerebellar Cortex3.83 ± 0.23
Cerebellar Nuclei3.49 ± 0.47
Claustrum3.3 ± 0.61
Epithalamus3.18 ± 0.65
Frontal Lobe3.37 ± 0.58
Globus Pallidus2.52 ± 0.53
Hypothalamus3.25 ± 0.47
Insula3.11 ± 0.64
Limbic Lobe3.37 ± 0.52
Mesencephalon3.41 ± 0.63
Myelencephalon3.31 ± 0.58
Occipital Lobe3.69 ± 0.48
Parietal Lobe3.54 ± 0.57
Pontine Tegmentum3.27 ± 0.56
Striatum3.09 ± 0.63
Subthalamus3.79 ± 0.27
Temporal Lobe3.29 ± 0.61
Thalamus3.4 ± 0.56
White Matter2.46 ± 0.13
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Ugp2CBCerebellum93.28
100
Ugp2CTXCerebral cortex100
100
Ugp2HIPHippocampal region100
100
Ugp2HPFHippocampal formation100
100
Ugp2HYHypothalamus100
100
Ugp2LSXLateral septal complex100
100
Ugp2MBMidbrain100
100
Ugp2MYMedulla100
100
Ugp2OLFOlfactory bulb100
100
Ugp2PPons100
100
Ugp2PALPallidum100
100
Ugp2RHPRetrohippocampal region100
100
Ugp2sAMYStriatum-like amygdalar nuclei100
100
Ugp2STRStriatum100
100
Ugp2STRdStriatum dorsal region100
100
Ugp2STRvStriatum ventral region100
100
Ugp2THThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00000932 10 276 285 CEFVMEVTNK Peptide Atlas
UGPA_HUMAN_0 0 0 0 IQRPPEDSIQPYEK PRIDE
UGPA_HUMAN_0 0 0 0 RCEFVMEVTNK PRIDE
UGPA_HUMAN_0 0 0 0 SFENSLGINVPR PRIDE
UGPA_HUMAN_133 18 133 150 NENTFLDLTVQQIEHLNK PRIDE
UGPA_HUMAN_2 13 2 14 SQDGASQFQEVIR PRIDE
UGPA_HUMAN_274 11 274 284 RCEFVMEVTNK PRIDE
UGPA_HUMAN_303 9 303 311 LVEIAQVPK PRIDE
UGPA_HUMAN_325 15 325 339 IFNTNNLWISLAAVK PRIDE
UGPA_HUMAN_357 20 357 376 TLDGGLNVIQLETAVGAAIK PRIDE
UGPA_HUMAN_377 12 377 388 SFENSLGINVPR PRIDE
UGPA_HUMAN_38 15 38 52 ILTTASSHEFEHTKK PRIDE
UGPA_HUMAN_396 26 396 421 TTSDLLLVMSNLYSLNAGSLTMSEKR PRIDE
UGPA_HUMAN_64 13 64 76 FLQEKGPSVDWGK PRIDE
UGPA_HUMAN_77 14 77 90 IQRPPEDSIQPYEK PRIDE
UGPA_HUMAN_95 12 95 106 GLPDNISSVLNK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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