AutismKB 2.0

Annotation Detail for UGT2B4


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Basic Information Top
Gene Symbol:UGT2B4 ( HLUG25,UDPGT2B4,UDPGTH1,UGT2B11 )
Gene Full Name: UDP glucuronosyltransferase 2 family, polypeptide B4
Band: 4q13.3
Quick LinksEntrez ID:7363; OMIM: 600067; Uniprot ID:UD2B4_HUMAN; ENSEMBL ID: ENSG00000156096; HGNC ID: 12553
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus11 / 56401219
neonate0 / 310970 
infant0 / 236200 
juvenile3 / 5555653
adult10 / 19391215
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor27 / 96359280
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal34 / 336030710
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye1 / 2110544
heart3 / 8962633
intestine0 / 2344720 
kidney1 / 2117774
larynx0 / 241450 
liver51 / 207743245
lung2 / 3369745
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206505_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.95
Adipocyte6.05
AdrenalCortex7.55
Adrenalgland5.55
Amygdala6.25
Appendix7.4
AtrioventricularNode6
BDCA4+_DentriticCells6.15
Bonemarrow7
BronchialEpithelialCells5.95
CD105+_Endothelial6.15
CD14+_Monocytes6.65
CD19+_BCells(neg._sel.)6.35
CD33+_Myeloid7.6
CD34+7.45
CD4+_Tcells6.3
CD56+_NKCells6.95
CD71+_EarlyErythroid6
CD8+_Tcells5.6
CardiacMyocytes10.35
Caudatenucleus5.6
Cerebellum5.15
CerebellumPeduncles7.6
CiliaryGanglion5.55
CingulateCortex6.55
Colorectaladenocarcinoma6.25
DorsalRootGanglion5.5
FetalThyroid6.25
Fetalbrain5.95
Fetalliver427.1
Fetallung4.8
GlobusPallidus5
Heart10.65
Hypothalamus6.4
Kidney5.7
Leukemia_chronicMyelogenousK-5625.6
Leukemia_promyelocytic-HL-605.55
Leukemialymphoblastic(MOLT-4)4.8
Liver237.65
Lung6.75
Lymphnode5.1
Lymphoma_burkitts(Daudi)8.25
Lymphoma_burkitts(Raji)9.45
MedullaOblongata5.6
OccipitalLobe5.5
OlfactoryBulb4.85
Ovary4.45
Pancreas5.15
PancreaticIslet6.75
ParietalLobe7.1
Pituitary7.25
Placenta6.1
Pons6.15
PrefrontalCortex7.4
Prostate7.1
Salivarygland5.25
SkeletalMuscle8.6
Skin5.6
SmoothMuscle6.95
Spinalcord6.6
SubthalamicNucleus6
SuperiorCervicalGanglion8.45
TemporalLobe5.85
Testis5.3
TestisGermCell4.9
TestisIntersitial5.3
TestisLeydigCell6.4
TestisSeminiferousTubule5.3
Thalamus6.5
Thymus4.7
Thyroid7.5
Tongue6.75
Tonsil6.2
Trachea5.15
TrigeminalGanglion7.4
Uterus4.9
UterusCorpus6.1
WholeBlood6.7
Wholebrain4.9
colon6.3
pineal_day7.58
pineal_night7.5
retina7.525
small_intestine5.95
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P335214
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.35 ± 0.98
Basal Forebrain1.92 ± 0.21
Basal Part of Pons1.52 ± 0.33
Cerebellar Cortex1.78 ± 0.78
Cerebellar Nuclei2.29 ± 0.82
Claustrum2.94 ± 0.87
Epithalamus1.63 ± 0.75
Frontal Lobe1.76 ± 0.65
Globus Pallidus2.5 ± 0.32
Hypothalamus1.93 ± 0.6
Insula1.96 ± 0.65
Limbic Lobe1.92 ± 0.59
Mesencephalon2.03 ± 0.65
Myelencephalon1.96 ± 0.67
Occipital Lobe1.95 ± 0.53
Parietal Lobe1.92 ± 0.65
Pontine Tegmentum2.02 ± 0.67
Striatum2.15 ± 0.81
Subthalamus2.07 ± 0.65
Temporal Lobe1.81 ± 0.63
Thalamus1.91 ± 0.63
White Matter2.53 ± 0.41
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Ugt2b1CBCerebellum0.56
1
Ugt2b1CTXCerebral cortex0.18
0.3
Ugt2b1HIPHippocampal region0.11
0.19
Ugt2b1HPFHippocampal formation0.12
0.19
Ugt2b1HYHypothalamus0.14
0.15
Ugt2b1LSXLateral septal complex0
0
Ugt2b1MBMidbrain0.12
0.22
Ugt2b1MYMedulla0.15
0.24
Ugt2b1OLFOlfactory bulb0.33
1.62
Ugt2b1PPons0.18
0.23
Ugt2b1PALPallidum0.26
0.57
Ugt2b1RHPRetrohippocampal region0.14
0.19
Ugt2b1sAMYStriatum-like amygdalar nuclei0.05
0
Ugt2b1STRStriatum0.08
0.1
Ugt2b1STRdStriatum dorsal region0.06
0.09
Ugt2b1STRvStriatum ventral region0.19
0.17
Ugt2b1THThalamus0.38
0.51
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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