AutismKB 2.0

Annotation Detail for COL14A1


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Basic Information Top
Gene Symbol:COL14A1 ( UND )
Gene Full Name: collagen, type XIV, alpha 1
Band: 8q24.12
Quick LinksEntrez ID:7373; OMIM: 120324; Uniprot ID:COEA1_HUMAN; ENSEMBL ID: ENSG00000187955; HGNC ID: 2191
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst1 / 6231916
fetus36 / 56401263
neonate0 / 310970 
infant0 / 236200 
juvenile2 / 5555635
adult46 / 193912123
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor2 / 9417821
cervical tumor0 / 343660 
chondrosarcoma4 / 8282348
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor5 / 11936941
germ cell tumor0 / 2638450 
glioma1 / 1068839
head and neck tumor3 / 13630222
kidney tumor2 / 6895929
leukemia0 / 958420 
liver tumor6 / 9635962
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia1 / 9725010
normal118 / 336030735
ovarian tumor3 / 7668239
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor5 / 12519139
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone2 / 7165527
bone marrow1 / 4880120
brain16 / 110098914
cervix0 / 481710 
connective tissue5 / 14925533
ear3 / 16212185
embryonic tissue6 / 21572227
esophagus0 / 202090 
eye12 / 21105456
heart8 / 8962689
intestine5 / 23447221
kidney5 / 21177723
larynx1 / 2414541
liver6 / 20774328
lung3 / 3369748
lymph0 / 442700 
lymph node1 / 9161010
mammary gland5 / 15327132
mouth0 / 670520 
muscle8 / 10771574
nerve2 / 15768126
ovary3 / 10205129
pancreas12 / 21481255
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta11 / 28082539
prostate5 / 18934526
salivary gland0 / 201550 
skin4 / 21057418
spleen1 / 5395218
stomach5 / 9661951
testis3 / 3304429
thymus0 / 811310 
thyroid2 / 4747342
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus8 / 23287834
vascular12 / 51780231
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 216866_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts13
Adipocyte11.85
AdrenalCortex17.05
Adrenalgland11.9
Amygdala12.65
Appendix12.2
AtrioventricularNode9.75
BDCA4+_DentriticCells7.95
Bonemarrow11.75
BronchialEpithelialCells11.65
CD105+_Endothelial10.7
CD14+_Monocytes12.35
CD19+_BCells(neg._sel.)9.45
CD33+_Myeloid12.25
CD34+15.3
CD4+_Tcells12.25
CD56+_NKCells13.4
CD71+_EarlyErythroid11.05
CD8+_Tcells8.95
CardiacMyocytes16.7
Caudatenucleus10.95
Cerebellum13.3
CerebellumPeduncles16.55
CiliaryGanglion8.65
CingulateCortex16.1
Colorectaladenocarcinoma12.1
DorsalRootGanglion10.65
FetalThyroid14.4
Fetalbrain11.75
Fetalliver10.35
Fetallung9.3
GlobusPallidus9.8
Heart17.2
Hypothalamus11.05
Kidney10.5
Leukemia_chronicMyelogenousK-56211.15
Leukemia_promyelocytic-HL-6010.6
Leukemialymphoblastic(MOLT-4)9.7
Liver22.8
Lung13.25
Lymphnode10.1
Lymphoma_burkitts(Daudi)15.3
Lymphoma_burkitts(Raji)18
MedullaOblongata11.75
OccipitalLobe10.8
OlfactoryBulb9.5
Ovary8.3
Pancreas10.05
PancreaticIslet12.65
ParietalLobe13.25
Pituitary14.1
Placenta12.5
Pons11.45
PrefrontalCortex12.25
Prostate12.4
Salivarygland9.65
SkeletalMuscle20.4
Skin9.85
SmoothMuscle14.15
Spinalcord12.8
SubthalamicNucleus10.95
SuperiorCervicalGanglion19.35
TemporalLobe11.25
Testis10.45
TestisGermCell10.55
TestisIntersitial10.05
TestisLeydigCell11.95
TestisSeminiferousTubule10.3
Thalamus12.2
Thymus9.65
Thyroid14.75
Tongue12.1
Tonsil11.85
Trachea14.25
TrigeminalGanglion12.2
Uterus9.9
UterusCorpus11
WholeBlood12.3
Wholebrain8.95
colon12.2
pineal_day14.86
pineal_night13.14
retina16.875
small_intestine11.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P254789
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.9 ± 0.8
Basal Forebrain3.76 ± 0.54
Basal Part of Pons3.92 ± 0.53
Cerebellar Cortex3.12 ± 0.8
Cerebellar Nuclei3.99 ± 0.8
Claustrum3.86 ± 0.78
Epithalamus3.79 ± 0.69
Frontal Lobe3.52 ± 0.88
Globus Pallidus4.9 ± 0.35
Hypothalamus3.74 ± 0.83
Insula3.58 ± 1.07
Limbic Lobe3.23 ± 0.8
Mesencephalon4.03 ± 0.79
Myelencephalon3.84 ± 0.8
Occipital Lobe4.21 ± 0.95
Parietal Lobe3.56 ± 0.77
Pontine Tegmentum3.53 ± 0.8
Striatum4.37 ± 0.64
Subthalamus3.35 ± 0.26
Temporal Lobe3.45 ± 0.89
Thalamus4.1 ± 0.72
White Matter4.76 ± 0.53
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Col14a1CBCerebellum10.81
12.53
Col14a1CTXCerebral cortex8.04
6.43
Col14a1HIPHippocampal region5.82
6.17
Col14a1HPFHippocampal formation8.12
7.44
Col14a1HYHypothalamus2.08
1.69
Col14a1LSXLateral septal complex1.72
1.96
Col14a1MBMidbrain4.31
4.36
Col14a1MYMedulla14.5
16.4
Col14a1OLFOlfactory bulb7.78
5.67
Col14a1PPons9.78
9.74
Col14a1PALPallidum4.59
4.05
Col14a1RHPRetrohippocampal region12.1
9.23
Col14a1sAMYStriatum-like amygdalar nuclei2.48
1.89
Col14a1STRStriatum2.48
2.03
Col14a1STRdStriatum dorsal region2.56
2.13
Col14a1STRvStriatum ventral region2.77
1.93
Col14a1THThalamus3.16
2.64
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
COEA1_HUMAN_1267 9 1267 1275 DALVSQPTR PRIDE
PAp00003239 13 972 984 HCFYGLQPDSEYK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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