AutismKB 2.0

Annotation Detail for UTRN


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Basic Information Top
Gene Symbol:UTRN ( DMDL,DRP,DRP1,FLJ23678 )
Gene Full Name: utrophin
Band: 6q24.2
Quick LinksEntrez ID:7402; OMIM: 128240; Uniprot ID:UTRO_HUMAN; ENSEMBL ID: ENSG00000152818; HGNC ID: 12635
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst6 / 6231996
fetus56 / 56401299
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult203 / 1939121104
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor8 / 9417884
cervical tumor0 / 343660 
chondrosarcoma9 / 82823108
colorectal tumor7 / 11424661
esophageal tumor1 / 1729057
gastrointestinal tumor5 / 11936941
germ cell tumor14 / 26384553
glioma1 / 1068839
head and neck tumor10 / 13630273
kidney tumor1 / 6895914
leukemia7 / 9584273
liver tumor6 / 9635962
lung tumor4 / 10312738
lymphoma0 / 717550 
non-neoplasia5 / 9725051
normal284 / 336030784
ovarian tumor1 / 7668213
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer4 / 10268038
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor8 / 12519163
uterine tumor9 / 9025799
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue3 / 13106228
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood4 / 12347832
bone2 / 7165527
bone marrow5 / 48801102
brain30 / 110098927
cervix1 / 4817120
connective tissue15 / 149255100
ear0 / 162120 
embryonic tissue11 / 21572250
esophagus1 / 2020949
eye13 / 21105461
heart15 / 89626167
intestine14 / 23447259
kidney16 / 21177775
larynx5 / 24145207
liver10 / 20774348
lung38 / 336974112
lymph0 / 442700 
lymph node4 / 9161043
mammary gland51 / 153271332
mouth2 / 6705229
muscle10 / 10771592
nerve0 / 157680 
ovary2 / 10205119
pancreas7 / 21481232
parathyroid5 / 20539243
pharynx8 / 41328193
pituitary gland0 / 165850 
placenta29 / 280825103
prostate22 / 189345116
salivary gland0 / 201550 
skin6 / 21057428
spleen1 / 5395218
stomach6 / 9661962
testis35 / 330442105
thymus2 / 8113124
thyroid3 / 4747363
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord0 / 136800 
uterus14 / 23287860
vascular4 / 5178077
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213023_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.5
Adipocyte8.4
AdrenalCortex7.15
Adrenalgland5.85
Amygdala7.4
Appendix7.55
AtrioventricularNode5.2
BDCA4+_DentriticCells10.05
Bonemarrow6.8
BronchialEpithelialCells6.35
CD105+_Endothelial7.05
CD14+_Monocytes8.45
CD19+_BCells(neg._sel.)6.65
CD33+_Myeloid9
CD34+8.85
CD4+_Tcells11.7
CD56+_NKCells18
CD71+_EarlyErythroid6.45
CD8+_Tcells8.75
CardiacMyocytes9
Caudatenucleus6.3
Cerebellum6.05
CerebellumPeduncles7.85
CiliaryGanglion4.85
CingulateCortex7.1
Colorectaladenocarcinoma6.85
DorsalRootGanglion5.25
FetalThyroid6.75
Fetalbrain6.95
Fetalliver6.75
Fetallung5.85
GlobusPallidus5.4
Heart8.7
Hypothalamus7.5
Kidney5.55
Leukemia_chronicMyelogenousK-5626.3
Leukemia_promyelocytic-HL-606.2
Leukemialymphoblastic(MOLT-4)5.65
Liver9.1
Lung7.65
Lymphnode6.05
Lymphoma_burkitts(Daudi)8.85
Lymphoma_burkitts(Raji)10.8
MedullaOblongata6.45
OccipitalLobe6.2
OlfactoryBulb6.75
Ovary4.55
Pancreas5.65
PancreaticIslet7
ParietalLobe7.5
Pituitary8.1
Placenta6.25
Pons7.15
PrefrontalCortex8.85
Prostate8.25
Salivarygland5.5
SkeletalMuscle8.05
Skin5.8
SmoothMuscle7.95
Spinalcord7.3
SubthalamicNucleus6.95
SuperiorCervicalGanglion9.4
TemporalLobe6.35
Testis25.15
TestisGermCell64.9
TestisIntersitial125.7
TestisLeydigCell38.5
TestisSeminiferousTubule19.95
Thalamus7.05
Thymus5.55
Thyroid8.65
Tongue6.8
Tonsil6.8
Trachea5.9
TrigeminalGanglion6.85
Uterus5.7
UterusCorpus6.15
WholeBlood7.7
Wholebrain5.9
colon7.05
pineal_day8.38
pineal_night8.54
retina8.35
small_intestine6.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P524014
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.42 ± 0.48
Basal Forebrain8.82 ± 0.07
Basal Part of Pons9.1 ± 0.27
Cerebellar Cortex7.89 ± 0.4
Cerebellar Nuclei9.15 ± 0.15
Claustrum8.91 ± 0.43
Epithalamus9.05 ± 0.24
Frontal Lobe8.46 ± 0.48
Globus Pallidus9.1 ± 0.28
Hypothalamus9.01 ± 0.28
Insula8.47 ± 0.25
Limbic Lobe8.15 ± 0.65
Mesencephalon8.87 ± 0.49
Myelencephalon8.66 ± 0.45
Occipital Lobe9.14 ± 0.67
Parietal Lobe8.63 ± 0.45
Pontine Tegmentum8.64 ± 0.52
Striatum9.67 ± 0.69
Subthalamus8.22 ± 0.41
Temporal Lobe8.38 ± 0.37
Thalamus8.59 ± 0.38
White Matter7.58 ± 0.26
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
UtrnCBCerebellum14.21
16.87
UtrnCTXCerebral cortex24.86
20.64
UtrnHIPHippocampal region7.6
8.4
UtrnHPFHippocampal formation13.07
12.6
UtrnHYHypothalamus8.38
7.31
UtrnLSXLateral septal complex4.99
4.11
UtrnMBMidbrain8.16
8.49
UtrnMYMedulla29.38
38.76
UtrnOLFOlfactory bulb26.2
22.21
UtrnPPons22.83
29.49
UtrnPALPallidum12.04
11.45
UtrnRHPRetrohippocampal region20.94
17.31
UtrnsAMYStriatum-like amygdalar nuclei9.68
7.6
UtrnSTRStriatum43.05
33.23
UtrnSTRdStriatum dorsal region51.15
39.62
UtrnSTRvStriatum ventral region49.79
37.3
UtrnTHThalamus7.82
8.49
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00006427 20 1055 1074 QLDQCSAFVNEIETIESSLK Peptide Atlas
UTRO_HUMAN_2564 10 2564 2573 LLMSLEELIK PRIDE
UTRO_HUMAN_2773 8 2773 2780 QLDDLNMR PRIDE
UTRO_HUMAN_48 14 48 61 SGKPPINDMFTDLK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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