AutismKB 2.0

Annotation Detail for CEMP1


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Basic Information Top
Gene Symbol:CEMP1 ( CP-23,CP23 )
Gene Full Name: cementum protein 1
Band: 16p13.3
Quick LinksEntrez ID:752014; OMIM: 611113; Uniprot ID:CEMP1_HUMAN; ENSEMBL ID: ENSG00000205923; HGNC ID: 32553
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst7 / 62319112
fetus29 / 56401251
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult65 / 193912133
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor4 / 9417842
cervical tumor0 / 343660 
chondrosarcoma4 / 8282348
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor17 / 26384564
glioma8 / 10688374
head and neck tumor2 / 13630214
kidney tumor0 / 689590 
leukemia5 / 9584252
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma1 / 7175513
non-neoplasia1 / 9725010
normal140 / 336030741
ovarian tumor1 / 7668213
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor6 / 12494948
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder1 / 2975733
blood4 / 12347832
bone0 / 716550 
bone marrow0 / 488010 
brain27 / 110098924
cervix0 / 481710 
connective tissue3 / 14925520
ear0 / 162120 
embryonic tissue17 / 21572278
esophagus0 / 202090 
eye15 / 21105471
heart0 / 896260 
intestine5 / 23447221
kidney7 / 21177733
larynx0 / 241450 
liver0 / 2077430 
lung11 / 33697432
lymph1 / 4427022
lymph node2 / 9161021
mammary gland4 / 15327126
mouth2 / 6705229
muscle0 / 1077150 
nerve0 / 157680 
ovary8 / 10205178
pancreas10 / 21481246
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta10 / 28082535
prostate7 / 18934536
salivary gland0 / 201550 
skin10 / 21057447
spleen1 / 5395218
stomach1 / 9661910
testis7 / 33044221
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus4 / 23287817
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 222009_at
Cell line Expression level Expression bar
721_B_lymphoblasts15.35
Adipocyte19.55
AdrenalCortex21.2
Adrenalgland14.15
Amygdala16.15
Appendix18
AtrioventricularNode24.8
BDCA4+_DentriticCells16.25
Bonemarrow19.25
BronchialEpithelialCells12.6
CD105+_Endothelial15.85
CD14+_Monocytes16.85
CD19+_BCells(neg._sel.)16.5
CD33+_Myeloid19.75
CD34+19.95
CD4+_Tcells17.2
CD56+_NKCells16.05
CD71+_EarlyErythroid20.9
CD8+_Tcells14.7
CardiacMyocytes22.7
Caudatenucleus14.3
Cerebellum13.2
CerebellumPeduncles20.85
CiliaryGanglion13.45
CingulateCortex22.7
Colorectaladenocarcinoma16.2
DorsalRootGanglion17.45
FetalThyroid15.5
Fetalbrain15.15
Fetalliver14.3
Fetallung12.9
GlobusPallidus14.4
Heart30.45
Hypothalamus17.05
Kidney17
Leukemia_chronicMyelogenousK-56215.05
Leukemia_promyelocytic-HL-6016.6
Leukemialymphoblastic(MOLT-4)12.65
Liver27.1
Lung17.45
Lymphnode12.3
Lymphoma_burkitts(Daudi)20.4
Lymphoma_burkitts(Raji)23.05
MedullaOblongata15.45
OccipitalLobe14.35
OlfactoryBulb12.65
Ovary13.8
Pancreas15.15
PancreaticIslet17.4
ParietalLobe21.25
Pituitary18.75
Placenta16.15
Pons27.2
PrefrontalCortex19
Prostate18.4
Salivarygland13.05
SkeletalMuscle54
Skin18.8
SmoothMuscle14.9
Spinalcord17.05
SubthalamicNucleus15.1
SuperiorCervicalGanglion19.3
TemporalLobe18.15
Testis14.2
TestisGermCell13.65
TestisIntersitial10.5
TestisLeydigCell19.3
TestisSeminiferousTubule16.9
Thalamus19.2
Thymus12.3
Thyroid19.7
Tongue16.6
Tonsil17
Trachea13.25
TrigeminalGanglion18.05
Uterus12.95
UterusCorpus15.75
WholeBlood14.25
Wholebrain13
colon16.15
pineal_day17.8
pineal_night22.38
retina21.8
small_intestine15.4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_34_PI416383280
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.66 ± 1.02
Basal Forebrain2.36 ± 0.18
Basal Part of Pons2.13 ± 0.78
Cerebellar Cortex2.14 ± 0.72
Cerebellar Nuclei2.65 ± 0.75
Claustrum3.07 ± 0.83
Epithalamus2.06 ± 0.77
Frontal Lobe2.1 ± 0.65
Globus Pallidus2.99 ± 0.58
Hypothalamus2.27 ± 0.63
Insula2.18 ± 0.4
Limbic Lobe2.25 ± 0.58
Mesencephalon2.45 ± 0.76
Myelencephalon2.26 ± 0.62
Occipital Lobe2.27 ± 0.57
Parietal Lobe2.23 ± 0.66
Pontine Tegmentum2.29 ± 0.63
Striatum2.45 ± 0.59
Subthalamus2.4 ± 0.65
Temporal Lobe2.15 ± 0.64
Thalamus2.23 ± 0.57
White Matter3.12 ± 0.81
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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