AutismKB 2.0

Annotation Detail for ZNF12


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Basic Information Top
Gene Symbol:ZNF12 ( GIOT-3,HZF11,KOX3,ZNF325 )
Gene Full Name: zinc finger protein 12
Band: 7p22.1
Quick LinksEntrez ID:7559; OMIM: 194536; Uniprot ID:ZNF12_HUMAN; ENSEMBL ID: ENSG00000164631; HGNC ID: 12902
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst3 / 6231948
fetus20 / 56401235
neonate0 / 310970 
infant2 / 2362084
juvenile1 / 5555617
adult68 / 193912135
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma2 / 17475114
breast (mammary gland) tumor1 / 9417810
cervical tumor3 / 3436687
chondrosarcoma5 / 8282360
colorectal tumor10 / 11424687
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor11 / 26384541
glioma2 / 10688318
head and neck tumor3 / 13630222
kidney tumor0 / 689590 
leukemia2 / 9584220
liver tumor3 / 9635931
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia1 / 9725010
normal97 / 336030728
ovarian tumor1 / 7668213
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS7 / 12568055
prostate cancer0 / 1026800 
retinoblastoma2 / 4635643
skin tumor4 / 12494932
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites1 / 4001524
bladder1 / 2975733
blood1 / 1234788
bone5 / 7165569
bone marrow1 / 4880120
brain19 / 110098917
cervix3 / 4817162
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue12 / 21572255
esophagus0 / 202090 
eye4 / 21105418
heart5 / 8962655
intestine14 / 23447259
kidney6 / 21177728
larynx0 / 241450 
liver6 / 20774328
lung3 / 3369748
lymph1 / 4427022
lymph node6 / 9161065
mammary gland5 / 15327132
mouth0 / 670520 
muscle1 / 1077159
nerve1 / 1576863
ovary3 / 10205129
pancreas4 / 21481218
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta8 / 28082528
prostate5 / 18934526
salivary gland1 / 2015549
skin8 / 21057437
spleen3 / 5395255
stomach5 / 9661951
testis13 / 33044239
thymus2 / 8113124
thyroid2 / 4747342
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus11 / 23287847
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219571_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts38.4
Adipocyte10.55
AdrenalCortex15.3
Adrenalgland9.6
Amygdala37.45
Appendix17.1
AtrioventricularNode10.1
BDCA4+_DentriticCells18.4
Bonemarrow11.8
BronchialEpithelialCells14.9
CD105+_Endothelial17.3
CD14+_Monocytes16.45
CD19+_BCells(neg._sel.)39.05
CD33+_Myeloid15.3
CD34+39.3
CD4+_Tcells82
CD56+_NKCells17.7
CD71+_EarlyErythroid10.1
CD8+_Tcells115.85
CardiacMyocytes21.95
Caudatenucleus8.75
Cerebellum12.35
CerebellumPeduncles16.5
CiliaryGanglion9.75
CingulateCortex13.65
Colorectaladenocarcinoma42.25
DorsalRootGanglion10.9
FetalThyroid21.85
Fetalbrain15.3
Fetalliver18.85
Fetallung12.2
GlobusPallidus11.05
Heart16.9
Hypothalamus15.55
Kidney9.45
Leukemia_chronicMyelogenousK-56220.1
Leukemia_promyelocytic-HL-6016.1
Leukemialymphoblastic(MOLT-4)9.2
Liver15.5
Lung10.9
Lymphnode10.8
Lymphoma_burkitts(Daudi)19.25
Lymphoma_burkitts(Raji)23.55
MedullaOblongata18.4
OccipitalLobe20.55
OlfactoryBulb20.15
Ovary8.45
Pancreas14
PancreaticIslet16.5
ParietalLobe15.05
Pituitary49
Placenta9.7
Pons10.55
PrefrontalCortex66.45
Prostate20.35
Salivarygland9.65
SkeletalMuscle17.1
Skin12.1
SmoothMuscle16.35
Spinalcord11.95
SubthalamicNucleus19.9
SuperiorCervicalGanglion19.05
TemporalLobe10.75
Testis8.25
TestisGermCell14.75
TestisIntersitial8.6
TestisLeydigCell11.55
TestisSeminiferousTubule9.2
Thalamus12.6
Thymus8.3
Thyroid31.7
Tongue14.4
Tonsil19.5
Trachea13.1
TrigeminalGanglion14.65
Uterus98.25
UterusCorpus14.1
WholeBlood23.3
Wholebrain13.45
colon17.05
pineal_day28.98
pineal_night35.3
retina13.775
small_intestine9.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P31335
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.57 ± 0.35
Basal Forebrain7.76 ± 0.15
Basal Part of Pons7.89 ± 0.2
Cerebellar Cortex8.19 ± 0.15
Cerebellar Nuclei7.91 ± 0.23
Claustrum7.48 ± 0.46
Epithalamus8.26 ± 0.25
Frontal Lobe7.91 ± 0.27
Globus Pallidus7.59 ± 0.16
Hypothalamus7.95 ± 0.23
Insula7.91 ± 0.16
Limbic Lobe7.71 ± 0.36
Mesencephalon7.82 ± 0.32
Myelencephalon7.8 ± 0.35
Occipital Lobe7.82 ± 0.33
Parietal Lobe7.87 ± 0.31
Pontine Tegmentum7.83 ± 0.3
Striatum7.54 ± 0.25
Subthalamus7.59 ± 0.65
Temporal Lobe7.9 ± 0.25
Thalamus7.82 ± 0.21
White Matter7.94 ± 0.24
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Zfp12CBCerebellum100
100
Zfp12CTXCerebral cortex100
100
Zfp12HIPHippocampal region100
100
Zfp12HPFHippocampal formation100
100
Zfp12HYHypothalamus100
100
Zfp12LSXLateral septal complex100
100
Zfp12MBMidbrain100
100
Zfp12MYMedulla100
100
Zfp12OLFOlfactory bulb100
100
Zfp12PPons100
100
Zfp12PALPallidum100
100
Zfp12RHPRetrohippocampal region100
100
Zfp12sAMYStriatum-like amygdalar nuclei100
100
Zfp12STRStriatum100
100
Zfp12STRdStriatum dorsal region100
100
Zfp12STRvStriatum ventral region100
100
Zfp12THThalamus100
100
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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