AutismKB 2.0

Annotation Detail for ZNF16


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Basic Information Top
Gene Symbol:ZNF16 ( KOX9 )
Gene Full Name: zinc finger protein 16
Band: 8q24.3
Quick LinksEntrez ID:7564; OMIM: 601262; Uniprot ID:ZNF16_HUMAN; ENSEMBL ID: ENSG00000170631; HGNC ID: 12947
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus15 / 56401226
neonate1 / 3109732
infant0 / 236200 
juvenile3 / 5555653
adult10 / 19391215
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor2 / 3436658
chondrosarcoma0 / 828230 
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor1 / 2638453
glioma0 / 1068830 
head and neck tumor5 / 13630236
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor3 / 9635931
lung tumor0 / 1031270 
lymphoma4 / 7175555
non-neoplasia3 / 9725030
normal61 / 336030718
ovarian tumor1 / 7668213
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone1 / 7165513
bone marrow0 / 488010 
brain24 / 110098921
cervix2 / 4817141
connective tissue5 / 14925533
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye3 / 21105414
heart0 / 896260 
intestine3 / 23447212
kidney6 / 21177728
larynx0 / 241450 
liver4 / 20774319
lung2 / 3369745
lymph0 / 442700 
lymph node1 / 9161010
mammary gland2 / 15327113
mouth4 / 6705259
muscle0 / 1077150 
nerve1 / 1576863
ovary1 / 1020519
pancreas4 / 21481218
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate4 / 18934521
salivary gland0 / 201550 
skin2 / 2105749
spleen2 / 5395237
stomach0 / 966190 
testis6 / 33044218
thymus1 / 8113112
thyroid1 / 4747321
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus2 / 2328788
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219548_at
Cell line Expression level Expression bar
721_B_lymphoblasts9.45
Adipocyte4.85
AdrenalCortex5.45
Adrenalgland4.2
Amygdala5.05
Appendix5.05
AtrioventricularNode4.3
BDCA4+_DentriticCells5.55
Bonemarrow5
BronchialEpithelialCells5.75
CD105+_Endothelial5.05
CD14+_Monocytes5.6
CD19+_BCells(neg._sel.)7.85
CD33+_Myeloid7.3
CD34+7.15
CD4+_Tcells5.45
CD56+_NKCells8.55
CD71+_EarlyErythroid5.45
CD8+_Tcells6.3
CardiacMyocytes6.9
Caudatenucleus4.4
Cerebellum4
CerebellumPeduncles6.45
CiliaryGanglion3.5
CingulateCortex5
Colorectaladenocarcinoma4.95
DorsalRootGanglion3.8
FetalThyroid5.75
Fetalbrain4.8
Fetalliver4.3
Fetallung4.05
GlobusPallidus3.65
Heart6.7
Hypothalamus5.25
Kidney4
Leukemia_chronicMyelogenousK-5624.5
Leukemia_promyelocytic-HL-604.45
Leukemialymphoblastic(MOLT-4)3.95
Liver6.75
Lung5.45
Lymphnode4.15
Lymphoma_burkitts(Daudi)6.5
Lymphoma_burkitts(Raji)7.2
MedullaOblongata4.4
OccipitalLobe4.4
OlfactoryBulb3.95
Ovary3.3
Pancreas4.75
PancreaticIslet5.35
ParietalLobe5.2
Pituitary5.75
Placenta4.9
Pons4.7
PrefrontalCortex6.2
Prostate5.85
Salivarygland4
SkeletalMuscle6
Skin4
SmoothMuscle5.6
Spinalcord5.25
SubthalamicNucleus4.5
SuperiorCervicalGanglion5.6
TemporalLobe4.55
Testis6.3
TestisGermCell5
TestisIntersitial6
TestisLeydigCell4.9
TestisSeminiferousTubule4.35
Thalamus5
Thymus3.8
Thyroid6.55
Tongue5
Tonsil4.8
Trachea4.05
TrigeminalGanglion5.15
Uterus4.35
UterusCorpus4.55
WholeBlood5.4
Wholebrain4
colon5.05
pineal_day6.2
pineal_night5.96
retina5.9
small_intestine4.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5392_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.35 ± 1.18
Basal Forebrain2.32 ± 0.78
Basal Part of Pons1.94 ± 0.69
Cerebellar Cortex1.9 ± 0.84
Cerebellar Nuclei2.31 ± 0.99
Claustrum2.75 ± 0.71
Epithalamus1.78 ± 0.98
Frontal Lobe2.05 ± 0.92
Globus Pallidus3.17 ± 0.76
Hypothalamus2.11 ± 0.82
Insula1.87 ± 1.04
Limbic Lobe1.93 ± 1.11
Mesencephalon2.15 ± 1.03
Myelencephalon2.14 ± 0.99
Occipital Lobe2.23 ± 1.11
Parietal Lobe1.93 ± 1.04
Pontine Tegmentum2.16 ± 0.98
Striatum2.24 ± 0.88
Subthalamus2.04 ± 1.33
Temporal Lobe1.77 ± 0.88
Thalamus2.18 ± 0.76
White Matter3.98 ± 0.57
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018