AutismKB 2.0

Annotation Detail for ZNF140


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Basic Information Top
Gene Symbol:ZNF140 ( pHZ-39 )
Gene Full Name: zinc finger protein 140
Band: 12q24.33
Quick LinksEntrez ID:7699; OMIM: 604082; Uniprot ID:ZN140_HUMAN; ENSEMBL ID: ENSG00000196387; HGNC ID: 12925
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus22 / 56401239
neonate0 / 310970 
infant4 / 23620169
juvenile4 / 5555671
adult37 / 193912119
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma1 / 1747557
breast (mammary gland) tumor7 / 9417874
cervical tumor2 / 3436658
chondrosarcoma3 / 8282336
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor17 / 26384564
glioma4 / 10688337
head and neck tumor1 / 1363027
kidney tumor1 / 6895914
leukemia1 / 9584210
liver tumor2 / 9635920
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia2 / 9725020
normal76 / 336030722
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS6 / 12568047
prostate cancer3 / 10268029
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor5 / 12519139
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites0 / 400150 
bladder1 / 2975733
blood4 / 12347832
bone1 / 7165513
bone marrow0 / 488010 
brain40 / 110098936
cervix3 / 4817162
connective tissue4 / 14925526
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus0 / 202090 
eye3 / 21105414
heart2 / 8962622
intestine2 / 2344728
kidney7 / 21177733
larynx0 / 241450 
liver7 / 20774333
lung7 / 33697420
lymph0 / 442700 
lymph node0 / 916100 
mammary gland8 / 15327152
mouth1 / 6705214
muscle1 / 1077159
nerve0 / 157680 
ovary0 / 1020510 
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta3 / 28082510
prostate5 / 18934526
salivary gland0 / 201550 
skin2 / 2105749
spleen1 / 5395218
stomach1 / 9661910
testis16 / 33044248
thymus3 / 8113136
thyroid3 / 4747363
tonsil0 / 169990 
trachea4 / 5241376
umbilical cord0 / 136800 
uterus12 / 23287851
vascular1 / 5178019
Microarray in BioGPS Top
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  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204523_at
Cell line Expression level Expression bar
721_B_lymphoblasts11.15
Adipocyte8.45
AdrenalCortex11
Adrenalgland7.55
Amygdala9.55
Appendix10.8
AtrioventricularNode10.25
BDCA4+_DentriticCells11.15
Bonemarrow9.35
BronchialEpithelialCells9.05
CD105+_Endothelial10.05
CD14+_Monocytes10.5
CD19+_BCells(neg._sel.)10.15
CD33+_Myeloid11
CD34+11.05
CD4+_Tcells11.9
CD56+_NKCells11.05
CD71+_EarlyErythroid9
CD8+_Tcells11.1
CardiacMyocytes19.4
Caudatenucleus7.55
Cerebellum7.75
CerebellumPeduncles11.1
CiliaryGanglion7.65
CingulateCortex10.1
Colorectaladenocarcinoma9.35
DorsalRootGanglion8.2
FetalThyroid10.55
Fetalbrain9.25
Fetalliver7.95
Fetallung7.2
GlobusPallidus7.5
Heart15.55
Hypothalamus9.55
Kidney7.7
Leukemia_chronicMyelogenousK-5627.8
Leukemia_promyelocytic-HL-608.2
Leukemialymphoblastic(MOLT-4)7.45
Liver13.9
Lung9.85
Lymphnode11.1
Lymphoma_burkitts(Daudi)10.9
Lymphoma_burkitts(Raji)12.9
MedullaOblongata8.25
OccipitalLobe7.3
OlfactoryBulb7.15
Ovary6.5
Pancreas8.15
PancreaticIslet10.2
ParietalLobe11
Pituitary12.3
Placenta10.1
Pons9.05
PrefrontalCortex10.65
Prostate10
Salivarygland8.5
SkeletalMuscle15.05
Skin10.1
SmoothMuscle10.55
Spinalcord9.4
SubthalamicNucleus8.6
SuperiorCervicalGanglion22.65
TemporalLobe9.05
Testis8
TestisGermCell8.6
TestisIntersitial10.55
TestisLeydigCell10.2
TestisSeminiferousTubule8.35
Thalamus9.1
Thymus6.75
Thyroid29.8
Tongue10.1
Tonsil9.8
Trachea8.05
TrigeminalGanglion13.9
Uterus11.6
UterusCorpus11.3
WholeBlood10.3
Wholebrain6.85
colon9.7
pineal_day18.12
pineal_night17.88
retina12.05
small_intestine8.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_858_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.2 ± 0.38
Basal Forebrain6.94 ± 0.17
Basal Part of Pons6.53 ± 0.32
Cerebellar Cortex6.89 ± 0.23
Cerebellar Nuclei6.44 ± 0.28
Claustrum7.31 ± 0.4
Epithalamus6.51 ± 0.36
Frontal Lobe6.58 ± 0.37
Globus Pallidus7 ± 0.26
Hypothalamus6.63 ± 0.46
Insula6.73 ± 0.41
Limbic Lobe7 ± 0.39
Mesencephalon6.8 ± 0.41
Myelencephalon6.78 ± 0.44
Occipital Lobe7.08 ± 0.37
Parietal Lobe6.78 ± 0.45
Pontine Tegmentum6.85 ± 0.33
Striatum7.17 ± 0.42
Subthalamus6.65 ± 0.38
Temporal Lobe6.77 ± 0.33
Thalamus6.69 ± 0.38
White Matter7.51 ± 0.51
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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