AutismKB 2.0

Annotation Detail for VEZF1


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Basic Information Top
Gene Symbol:VEZF1 ( DB1,ZNF161 )
Gene Full Name: vascular endothelial zinc finger 1
Band: 17q22
Quick LinksEntrez ID:7716; OMIM: 606747; Uniprot ID:VEZF1_HUMAN; ENSEMBL ID: ENSG00000136451; HGNC ID: 12949
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body8 / 70761113
blastocyst2 / 6231932
fetus54 / 56401295
neonate0 / 310970 
infant1 / 2362042
juvenile4 / 5555671
adult97 / 193912150
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma6 / 8282372
colorectal tumor4 / 11424635
esophageal tumor0 / 172900 
gastrointestinal tumor3 / 11936925
germ cell tumor2 / 2638457
glioma5 / 10688346
head and neck tumor6 / 13630244
kidney tumor5 / 6895972
leukemia0 / 958420 
liver tumor7 / 9635972
lung tumor4 / 10312738
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal190 / 336030756
ovarian tumor1 / 7668213
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer9 / 10268087
retinoblastoma0 / 463560 
skin tumor3 / 12494924
soft tissue/muscle tissue tumor5 / 12519139
uterine tumor9 / 9025799
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone6 / 7165583
bone marrow0 / 488010 
brain27 / 110098924
cervix1 / 4817120
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue13 / 21572260
esophagus0 / 202090 
eye22 / 211054104
heart8 / 8962689
intestine10 / 23447242
kidney12 / 21177756
larynx3 / 24145124
liver16 / 20774377
lung41 / 336974121
lymph0 / 442700 
lymph node4 / 9161043
mammary gland8 / 15327152
mouth1 / 6705214
muscle3 / 10771527
nerve0 / 157680 
ovary1 / 1020519
pancreas18 / 21481283
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta8 / 28082528
prostate12 / 18934563
salivary gland1 / 2015549
skin6 / 21057428
spleen0 / 539520 
stomach2 / 9661920
testis7 / 33044221
thymus4 / 8113149
thyroid2 / 4747342
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus17 / 23287872
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202171_at
Cell line Expression level Expression bar
721_B_lymphoblasts13.9
Adipocyte6.85
AdrenalCortex10.55
Adrenalgland10.8
Amygdala9.8
Appendix8.35
AtrioventricularNode6.2
BDCA4+_DentriticCells102.7
Bonemarrow7.65
BronchialEpithelialCells8.8
CD105+_Endothelial36
CD14+_Monocytes67.2
CD19+_BCells(neg._sel.)42.95
CD33+_Myeloid62.25
CD34+41.75
CD4+_Tcells47.45
CD56+_NKCells69
CD71+_EarlyErythroid36.6
CD8+_Tcells41.35
CardiacMyocytes10.65
Caudatenucleus7.5
Cerebellum6.3
CerebellumPeduncles8.75
CiliaryGanglion5.4
CingulateCortex5.2
Colorectaladenocarcinoma36.55
DorsalRootGanglion5.35
FetalThyroid16.1
Fetalbrain8.55
Fetalliver7.65
Fetallung27.85
GlobusPallidus4.3
Heart7.55
Hypothalamus13.05
Kidney6.55
Leukemia_chronicMyelogenousK-5627.55
Leukemia_promyelocytic-HL-605.7
Leukemialymphoblastic(MOLT-4)26.7
Liver9
Lung6.1
Lymphnode7.4
Lymphoma_burkitts(Daudi)11.4
Lymphoma_burkitts(Raji)10.05
MedullaOblongata7.6
OccipitalLobe7.4
OlfactoryBulb6.5
Ovary5.05
Pancreas7.2
PancreaticIslet11.15
ParietalLobe9.9
Pituitary27.25
Placenta12.8
Pons8.2
PrefrontalCortex10.1
Prostate31.75
Salivarygland6.95
SkeletalMuscle9.5
Skin3.95
SmoothMuscle19.1
Spinalcord11.15
SubthalamicNucleus6.15
SuperiorCervicalGanglion7.05
TemporalLobe6.25
Testis6.7
TestisGermCell11.2
TestisIntersitial6.55
TestisLeydigCell8.3
TestisSeminiferousTubule7.25
Thalamus8.15
Thymus25.05
Thyroid49.85
Tongue8.6
Tonsil8.45
Trachea18.6
TrigeminalGanglion7.9
Uterus33.4
UterusCorpus8.9
WholeBlood97.1
Wholebrain5.85
colon27.5
pineal_day99.54
pineal_night100.94
retina15.45
small_intestine23
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P206981
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.62 ± 0.39
Basal Forebrain7.22 ± 0.35
Basal Part of Pons6.62 ± 0.29
Cerebellar Cortex6.95 ± 0.18
Cerebellar Nuclei7.31 ± 0.39
Claustrum6.64 ± 0.32
Epithalamus7.85 ± 0.25
Frontal Lobe6.74 ± 0.49
Globus Pallidus8.01 ± 0.35
Hypothalamus6.94 ± 0.27
Insula6.55 ± 0.21
Limbic Lobe6.64 ± 0.57
Mesencephalon7.11 ± 0.43
Myelencephalon7.02 ± 0.5
Occipital Lobe7.3 ± 0.58
Parietal Lobe6.92 ± 0.38
Pontine Tegmentum7.05 ± 0.38
Striatum7.37 ± 0.59
Subthalamus7.05 ± 0.06
Temporal Lobe6.66 ± 0.38
Thalamus7.19 ± 0.22
White Matter8.77 ± 0.33
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Vezf1CBCerebellum0.97
1.5
Vezf1CTXCerebral cortex0.85
0.76
Vezf1HIPHippocampal region0.37
0.48
Vezf1HPFHippocampal formation0.61
0.66
Vezf1HYHypothalamus0.44
0.37
Vezf1LSXLateral septal complex2.49
1.49
Vezf1MBMidbrain1.02
1.21
Vezf1MYMedulla0.51
0.46
Vezf1OLFOlfactory bulb0.88
0.61
Vezf1PPons1.11
1.67
Vezf1PALPallidum0.62
0.44
Vezf1RHPRetrohippocampal region0.92
0.84
Vezf1sAMYStriatum-like amygdalar nuclei0.47
0.4
Vezf1STRStriatum0.62
0.49
Vezf1STRdStriatum dorsal region0.47
0.42
Vezf1STRvStriatum ventral region0.29
0.26
Vezf1THThalamus0.32
0.21
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00011456 17 223 239 SHEGGITKPYTCSVCGK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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