Annotation Detail for ZNF187
Basic Information Top
| Gene Symbol: | ZNF187 ( MGC2815,SRE-ZBP,ZSCAN26 ) |
|---|---|
| Gene Full Name: | zinc finger protein 187 |
| Band: | 6p21.31 |
| Quick Links | Entrez ID:7741; OMIM: NA; Uniprot ID:ZN187_HUMAN; ENSEMBL ID: ; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.157883
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 36 / 564012 | 63 |  |
| neonate | 2 / 31097 | 64 | |
| infant | 3 / 23620 | 127 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 43 / 1939121 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 3 / 34366 | 87 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 5 / 68959 | 72 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 153 / 3360307 | 45 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 10 / 125680 | 79 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 |  |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 2 / 123478 | 16 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 60 / 1100989 | 54 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 11 / 211054 | 52 | |
| heart | 4 / 89626 | 44 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 1 / 24145 | 41 | |
| liver | 3 / 207743 | 14 | |
| lung | 2 / 336974 | 5 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 4 / 41328 | 96 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 9 / 280825 | 32 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 9 / 210574 | 42 | |
| spleen | 10 / 53952 | 185 | |
| stomach | 0 / 96619 | 0 | |
| testis | 5 / 330442 | 15 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 5 / 52413 | 95 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 23 / 232878 | 98 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_23_P145247
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.76 ± 0.51 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.92 ± 0.19 | |
| Basal Part of Pons | 5.79 ± 0.3 | |
| Cerebellar Cortex | 6.22 ± 0.17 | |
| Cerebellar Nuclei | 5.76 ± 0.28 | |
| Claustrum | 5.83 ± 0.38 | |
| Epithalamus | 5.8 ± 0.45 | |
| Frontal Lobe | 5.85 ± 0.28 | |
| Globus Pallidus | 6.03 ± 0.76 | |
| Hypothalamus | 6.09 ± 0.35 | |
| Insula | 5.99 ± 0.23 | |
| Limbic Lobe | 5.7 ± 0.38 | |
| Mesencephalon | 5.94 ± 0.4 | |
| Myelencephalon | 5.8 ± 0.38 | |
| Occipital Lobe | 5.83 ± 0.41 | |
| Parietal Lobe | 5.93 ± 0.36 | |
| Pontine Tegmentum | 5.91 ± 0.37 | |
| Striatum | 5.45 ± 0.24 | |
| Subthalamus | 6.09 ± 0.29 | |
| Temporal Lobe | 5.98 ± 0.27 | |
| Thalamus | 5.84 ± 0.32 | |
| White Matter | 6.07 ± 0.17 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Zfp187 | CB | Cerebellum | 39.61 | |
| 42.35 | | |||
| Zfp187 | CTX | Cerebral cortex | 71.16 | |
| 49.65 | | |||
| Zfp187 | HIP | Hippocampal region | 43.79 | |
| 56.18 | | |||
| Zfp187 | HPF | Hippocampal formation | 51.38 | |
| 51.54 | | |||
| Zfp187 | HY | Hypothalamus | 54.61 | |
| 40.41 | | |||
| Zfp187 | LSX | Lateral septal complex | 79.94 | |
| 55.12 | | |||
| Zfp187 | MB | Midbrain | 64.9 | |
| 55.77 | | |||
| Zfp187 | MY | Medulla | 47.53 | |
| 43.4 | | |||
| Zfp187 | OLF | Olfactory bulb | 61.41 | |
| 45.33 | | |||
| Zfp187 | P | Pons | 49.12 | |
| 43.67 | | |||
| Zfp187 | PAL | Pallidum | 38.87 | |
| 30.14 | | |||
| Zfp187 | RHP | Retrohippocampal region | 61.21 | |
| 46.27 | | |||
| Zfp187 | sAMY | Striatum-like amygdalar nuclei | 45 | |
| 28.99 | | |||
| Zfp187 | STR | Striatum | 42.02 | |
| 27.69 | | |||
| Zfp187 | STRd | Striatum dorsal region | 37.89 | |
| 25.59 | | |||
| Zfp187 | STRv | Striatum ventral region | 39.32 | |
| 23.77 | | |||
| Zfp187 | TH | Thalamus | 67.53 | |
| 55.63 | |