AutismKB 2.0

Annotation Detail for ZMYM2


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Basic Information Top
Gene Symbol:ZMYM2 ( FIM,MYM,RAMP,SCLL,ZNF198 )
Gene Full Name: zinc finger, MYM-type 2
Band: 13q12.11
Quick LinksEntrez ID:7750; OMIM: 602221; Uniprot ID:ZMYM2_HUMAN; ENSEMBL ID: ENSG00000121741; HGNC ID: 12989
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus3 / 5640125
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult4 / 19391212
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal4 / 33603071
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain1 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear2 / 16212123
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine2 / 2344728
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node1 / 9161010
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202778_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts83.9
Adipocyte23.95
AdrenalCortex37.55
Adrenalgland19.05
Amygdala49.95
Appendix32.7
AtrioventricularNode25.45
BDCA4+_DentriticCells128.6
Bonemarrow27.85
BronchialEpithelialCells37.25
CD105+_Endothelial50.65
CD14+_Monocytes39.3
CD19+_BCells(neg._sel.)41.9
CD33+_Myeloid66.55
CD34+63.95
CD4+_Tcells122
CD56+_NKCells59.9
CD71+_EarlyErythroid23.45
CD8+_Tcells136.1
CardiacMyocytes39.65
Caudatenucleus32.75
Cerebellum16.5
CerebellumPeduncles29.3
CiliaryGanglion25.4
CingulateCortex34.65
Colorectaladenocarcinoma38.8
DorsalRootGanglion23.8
FetalThyroid40.9
Fetalbrain121.95
Fetalliver23.7
Fetallung44.95
GlobusPallidus22.4
Heart24.7
Hypothalamus55.35
Kidney20.9
Leukemia_chronicMyelogenousK-56225.35
Leukemia_promyelocytic-HL-6054.95
Leukemialymphoblastic(MOLT-4)82.15
Liver24.95
Lung11.95
Lymphnode48.5
Lymphoma_burkitts(Daudi)85.3
Lymphoma_burkitts(Raji)102.45
MedullaOblongata29.8
OccipitalLobe46.4
OlfactoryBulb29.2
Ovary23.5
Pancreas82.05
PancreaticIslet36.55
ParietalLobe34.95
Pituitary50.3
Placenta17.9
Pons26.3
PrefrontalCortex105.85
Prostate35.75
Salivarygland44.2
SkeletalMuscle37.35
Skin26.8
SmoothMuscle31.75
Spinalcord39.25
SubthalamicNucleus31.15
SuperiorCervicalGanglion37.1
TemporalLobe31.25
Testis32
TestisGermCell141.85
TestisIntersitial46
TestisLeydigCell41.85
TestisSeminiferousTubule52.1
Thalamus40.6
Thymus20
Thyroid76.55
Tongue33.25
Tonsil35.3
Trachea25.5
TrigeminalGanglion51.05
Uterus53.75
UterusCorpus26.55
WholeBlood42.95
Wholebrain21.25
colon41.1
pineal_day221.36
pineal_night253.74
retina40.875
small_intestine24.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_8971_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.62 ± 0.21
Basal Forebrain8.66 ± 0.16
Basal Part of Pons8.62 ± 0.21
Cerebellar Cortex8.49 ± 0.16
Cerebellar Nuclei8.49 ± 0.19
Claustrum8.79 ± 0.26
Epithalamus8.56 ± 0.18
Frontal Lobe8.62 ± 0.23
Globus Pallidus8.67 ± 0.19
Hypothalamus8.61 ± 0.21
Insula8.58 ± 0.17
Limbic Lobe8.75 ± 0.25
Mesencephalon8.69 ± 0.21
Myelencephalon8.62 ± 0.22
Occipital Lobe8.9 ± 0.2
Parietal Lobe8.75 ± 0.2
Pontine Tegmentum8.65 ± 0.23
Striatum8.83 ± 0.2
Subthalamus8.64 ± 0.16
Temporal Lobe8.63 ± 0.2
Thalamus8.54 ± 0.18
White Matter9.29 ± 0.15
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Zmym2CBCerebellum34.24
44.76
Zmym2CTXCerebral cortex100
97.28
Zmym2HIPHippocampal region83.03
100
Zmym2HPFHippocampal formation86.26
96.79
Zmym2HYHypothalamus50.98
42.96
Zmym2LSXLateral septal complex100
93.02
Zmym2MBMidbrain47.79
46
Zmym2MYMedulla51.66
62.6
Zmym2OLFOlfactory bulb95.44
91.62
Zmym2PPons44.86
49.76
Zmym2PALPallidum63.28
62.74
Zmym2RHPRetrohippocampal region90.84
85.31
Zmym2sAMYStriatum-like amygdalar nuclei69.84
55.3
Zmym2STRStriatum92.69
82.64
Zmym2STRdStriatum dorsal region95.06
84.39
Zmym2STRvStriatum ventral region92.52
82.06
Zmym2THThalamus67.3
63.4
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00025668 10 789 798 HFCDQHCLLR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018