AutismKB 2.0

Annotation Detail for ZNF200


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Basic Information Top
Gene Symbol:ZNF200 ( MGC45293 )
Gene Full Name: zinc finger protein 200
Band: 16p13.3
Quick LinksEntrez ID:7752; OMIM: 603231; Uniprot ID:ZN200_HUMAN; ENSEMBL ID: ENSG00000010539; HGNC ID: 12993
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst0 / 623190 
fetus12 / 56401221
neonate1 / 3109732
infant1 / 2362042
juvenile2 / 5555635
adult36 / 193912118
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor1 / 3436629
chondrosarcoma3 / 8282336
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor5 / 11936941
germ cell tumor18 / 26384568
glioma0 / 1068830 
head and neck tumor3 / 13630222
kidney tumor3 / 6895943
leukemia0 / 958420 
liver tumor1 / 9635910
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal49 / 336030714
ovarian tumor0 / 766820 
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS7 / 12568055
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor1 / 1249498
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites1 / 4001524
bladder0 / 297570 
blood1 / 1234788
bone2 / 7165527
bone marrow1 / 4880120
brain13 / 110098911
cervix1 / 4817120
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus0 / 202090 
eye2 / 2110549
heart0 / 896260 
intestine4 / 23447217
kidney6 / 21177728
larynx1 / 2414541
liver2 / 2077439
lung2 / 3369745
lymph0 / 442700 
lymph node7 / 9161076
mammary gland4 / 15327126
mouth2 / 6705229
muscle1 / 1077159
nerve1 / 1576863
ovary0 / 1020510 
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx2 / 4132848
pituitary gland0 / 165850 
placenta6 / 28082521
prostate0 / 1893450 
salivary gland0 / 201550 
skin2 / 2105749
spleen1 / 5395218
stomach2 / 9661920
testis38 / 330442114
thymus5 / 8113161
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord1 / 1368073
uterus4 / 23287817
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 214706_at
Cell line Expression level Expression bar
721_B_lymphoblasts11.7
Adipocyte10.4
AdrenalCortex11.05
Adrenalgland8.65
Amygdala9.35
Appendix21.95
AtrioventricularNode8.4
BDCA4+_DentriticCells7.8
Bonemarrow10.8
BronchialEpithelialCells8.95
CD105+_Endothelial27.05
CD14+_Monocytes10.85
CD19+_BCells(neg._sel.)12.9
CD33+_Myeloid13.1
CD34+13.35
CD4+_Tcells11.2
CD56+_NKCells11
CD71+_EarlyErythroid10
CD8+_Tcells10.05
CardiacMyocytes22.5
Caudatenucleus8.65
Cerebellum9.6
CerebellumPeduncles11.6
CiliaryGanglion7.85
CingulateCortex11.05
Colorectaladenocarcinoma11.2
DorsalRootGanglion8.4
FetalThyroid11.9
Fetalbrain10.55
Fetalliver9.15
Fetallung8.45
GlobusPallidus7.7
Heart13.8
Hypothalamus10.65
Kidney8.1
Leukemia_chronicMyelogenousK-56212.45
Leukemia_promyelocytic-HL-609.15
Leukemialymphoblastic(MOLT-4)8.7
Liver13.3
Lung10.9
Lymphnode9.35
Lymphoma_burkitts(Daudi)16.85
Lymphoma_burkitts(Raji)15.65
MedullaOblongata9.4
OccipitalLobe9.15
OlfactoryBulb7.4
Ovary10.8
Pancreas8.7
PancreaticIslet11.25
ParietalLobe11.2
Pituitary15.55
Placenta10.75
Pons11.5
PrefrontalCortex12.6
Prostate11.35
Salivarygland8.75
SkeletalMuscle20.15
Skin9
SmoothMuscle10.85
Spinalcord10.05
SubthalamicNucleus9.4
SuperiorCervicalGanglion16.95
TemporalLobe10.1
Testis15.45
TestisGermCell17
TestisIntersitial16.85
TestisLeydigCell12.3
TestisSeminiferousTubule28.1
Thalamus10.65
Thymus8.65
Thyroid13.15
Tongue11
Tonsil10.45
Trachea9
TrigeminalGanglion16.5
Uterus8.55
UterusCorpus11.8
WholeBlood18.55
Wholebrain8.35
colon8.95
pineal_day12.16
pineal_night11.68
retina12.675
small_intestine7.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P152356
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.35 ± 0.51
Basal Forebrain5.36 ± 0.49
Basal Part of Pons5.75 ± 0.2
Cerebellar Cortex5.87 ± 0.22
Cerebellar Nuclei5.26 ± 0.6
Claustrum5.16 ± 0.86
Epithalamus5.33 ± 0.41
Frontal Lobe5.47 ± 0.41
Globus Pallidus5.11 ± 0.27
Hypothalamus5.7 ± 0.38
Insula5.53 ± 0.28
Limbic Lobe5.3 ± 0.41
Mesencephalon5.28 ± 0.44
Myelencephalon5.43 ± 0.45
Occipital Lobe5.36 ± 0.42
Parietal Lobe5.47 ± 0.4
Pontine Tegmentum5.46 ± 0.44
Striatum5.12 ± 0.36
Subthalamus5.26 ± 0.48
Temporal Lobe5.49 ± 0.36
Thalamus5.49 ± 0.46
White Matter4.79 ± 0.39
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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