AutismKB 2.0

Annotation Detail for RNF103


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:RNF103 ( KF1,MGC102815,MGC41857,ZFP103,hkf-1 )
Gene Full Name: ring finger protein 103
Band: 2p11.2
Quick LinksEntrez ID:7844; OMIM: 602507; Uniprot ID:RN103_HUMAN; ENSEMBL ID: ENSG00000115561; HGNC ID: 12859
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus19 / 56401233
neonate0 / 310970 
infant0 / 236200 
juvenile2 / 5555635
adult62 / 193912131
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma4 / 8282348
colorectal tumor8 / 11424670
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor11 / 26384541
glioma2 / 10688318
head and neck tumor2 / 13630214
kidney tumor1 / 6895914
leukemia3 / 9584231
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia4 / 9725041
normal123 / 336030736
ovarian tumor0 / 766820 
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer2 / 10268019
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland4 / 33197120
ascites0 / 400150 
bladder0 / 297570 
blood5 / 12347840
bone2 / 7165527
bone marrow2 / 4880140
brain67 / 110098960
cervix0 / 481710 
connective tissue2 / 14925513
ear1 / 1621261
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye4 / 21105418
heart4 / 8962644
intestine15 / 23447263
kidney6 / 21177728
larynx1 / 2414541
liver4 / 20774319
lung12 / 33697435
lymph0 / 442700 
lymph node3 / 9161032
mammary gland3 / 15327119
mouth1 / 6705214
muscle1 / 1077159
nerve1 / 1576863
ovary0 / 1020510 
pancreas12 / 21481255
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland2 / 16585120
placenta13 / 28082546
prostate3 / 18934515
salivary gland0 / 201550 
skin0 / 2105740 
spleen1 / 5395218
stomach2 / 9661920
testis16 / 33044248
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus9 / 23287838
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202636_at
Cell line Expression level Expression bar
721_B_lymphoblasts37.45
Adipocyte21.2
AdrenalCortex16.5
Adrenalgland23.05
Amygdala101.9
Appendix23.95
AtrioventricularNode19.6
BDCA4+_DentriticCells71.1
Bonemarrow24.05
BronchialEpithelialCells17.4
CD105+_Endothelial43
CD14+_Monocytes37.6
CD19+_BCells(neg._sel.)61.6
CD33+_Myeloid38.4
CD34+96.15
CD4+_Tcells54.35
CD56+_NKCells77.7
CD71+_EarlyErythroid67.45
CD8+_Tcells53.65
CardiacMyocytes27.8
Caudatenucleus39
Cerebellum101.8
CerebellumPeduncles129.3
CiliaryGanglion20.4
CingulateCortex31.7
Colorectaladenocarcinoma22.65
DorsalRootGanglion22.2
FetalThyroid15.55
Fetalbrain48.7
Fetalliver21.8
Fetallung26.5
GlobusPallidus21.7
Heart25.05
Hypothalamus115.7
Kidney7.75
Leukemia_chronicMyelogenousK-56217.75
Leukemia_promyelocytic-HL-6020.45
Leukemialymphoblastic(MOLT-4)17.75
Liver7.45
Lung25.15
Lymphnode25.9
Lymphoma_burkitts(Daudi)35.2
Lymphoma_burkitts(Raji)32.9
MedullaOblongata34
OccipitalLobe41.9
OlfactoryBulb159.35
Ovary17.65
Pancreas23.9
PancreaticIslet72.45
ParietalLobe31.8
Pituitary53.3
Placenta180.65
Pons23.2
PrefrontalCortex117.4
Prostate102.95
Salivarygland14.75
SkeletalMuscle9.05
Skin17.45
SmoothMuscle30.8
Spinalcord138.45
SubthalamicNucleus68.25
SuperiorCervicalGanglion27.4
TemporalLobe21.8
Testis25.9
TestisGermCell31.1
TestisIntersitial23.75
TestisLeydigCell30.15
TestisSeminiferousTubule21.3
Thalamus51.75
Thymus8.85
Thyroid38.9
Tongue18.8
Tonsil15.4
Trachea33
TrigeminalGanglion20.15
Uterus93.95
UterusCorpus23.3
WholeBlood48.85
Wholebrain83.5
colon32.1
pineal_day281.8
pineal_night242.94
retina129.9
small_intestine41.15
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_10392_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.57 ± 0.16
Basal Forebrain7.32 ± 0.19
Basal Part of Pons7.37 ± 0.24
Cerebellar Cortex7.67 ± 0.22
Cerebellar Nuclei7.29 ± 0.26
Claustrum7.4 ± 0.25
Epithalamus7.15 ± 0.46
Frontal Lobe7.24 ± 0.31
Globus Pallidus7.57 ± 0.43
Hypothalamus7.47 ± 0.27
Insula7.29 ± 0.27
Limbic Lobe7.37 ± 0.3
Mesencephalon7.48 ± 0.36
Myelencephalon7.36 ± 0.35
Occipital Lobe7.58 ± 0.28
Parietal Lobe7.37 ± 0.34
Pontine Tegmentum7.36 ± 0.33
Striatum7.53 ± 0.45
Subthalamus7.18 ± 0.22
Temporal Lobe7.3 ± 0.29
Thalamus7.29 ± 0.28
White Matter8.26 ± 0.16
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rnf103CBCerebellum35.27
49.23
Rnf103CTXCerebral cortex80.69
64.7
Rnf103HIPHippocampal region33.06
42.12
Rnf103HPFHippocampal formation43.91
46.04
Rnf103HYHypothalamus16.66
13.11
Rnf103LSXLateral septal complex20.23
16.27
Rnf103MBMidbrain28.23
25.6
Rnf103MYMedulla39.29
44.61
Rnf103OLFOlfactory bulb59.89
51.38
Rnf103PPons27.52
30.76
Rnf103PALPallidum31.03
29.52
Rnf103RHPRetrohippocampal region58.63
49.89
Rnf103sAMYStriatum-like amygdalar nuclei27.22
20.26
Rnf103STRStriatum64.41
50.22
Rnf103STRdStriatum dorsal region74.14
58.72
Rnf103STRvStriatum ventral region63.28
46.6
Rnf103THThalamus31.65
28.05
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved