AutismKB 2.0

Annotation Detail for ERI3


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Basic Information Top
Gene Symbol:ERI3 ( FLJ22943,MGC2683,PINT1,PRNPIP )
Gene Full Name: ERI1 exoribonuclease family member 3
Band: 1p34.1
Quick LinksEntrez ID:79033; OMIM: 609917; Uniprot ID:ERI3_HUMAN; ENSEMBL ID: ENSG00000117419; HGNC ID: 17276
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body11 / 70761155
blastocyst7 / 62319112
fetus56 / 56401299
neonate0 / 310970 
infant3 / 23620127
juvenile3 / 5555653
adult142 / 193912173
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor10 / 94178106
cervical tumor1 / 3436629
chondrosarcoma8 / 8282396
colorectal tumor11 / 11424696
esophageal tumor0 / 172900 
gastrointestinal tumor11 / 11936992
germ cell tumor19 / 26384572
glioma18 / 106883168
head and neck tumor9 / 13630266
kidney tumor8 / 68959116
leukemia5 / 9584252
liver tumor16 / 96359166
lung tumor12 / 103127116
lymphoma10 / 71755139
non-neoplasia4 / 9725041
normal243 / 336030772
ovarian tumor4 / 7668252
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS13 / 125680103
prostate cancer4 / 10268038
retinoblastoma8 / 46356172
skin tumor27 / 124949216
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites3 / 4001574
bladder0 / 297570 
blood9 / 12347872
bone11 / 71655153
bone marrow0 / 488010 
brain93 / 110098984
cervix5 / 48171103
connective tissue3 / 14925520
ear0 / 162120 
embryonic tissue22 / 215722101
esophagus0 / 202090 
eye25 / 211054118
heart8 / 8962689
intestine20 / 23447285
kidney13 / 21177761
larynx1 / 2414541
liver22 / 207743105
lung36 / 336974106
lymph4 / 4427090
lymph node6 / 9161065
mammary gland17 / 153271110
mouth3 / 6705244
muscle9 / 10771583
nerve1 / 1576863
ovary6 / 10205158
pancreas5 / 21481223
parathyroid6 / 20539292
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta17 / 28082560
prostate9 / 18934547
salivary gland5 / 20155248
skin31 / 210574147
spleen0 / 539520 
stomach15 / 96619155
testis26 / 33044278
thymus2 / 8113124
thyroid0 / 474730 
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord0 / 136800 
uterus2 / 2328788
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 208973_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.45
Adipocyte4.1
AdrenalCortex4.2
Adrenalgland3.5
Amygdala6.05
Appendix4.1
AtrioventricularNode3.1
BDCA4+_DentriticCells4.75
Bonemarrow4
BronchialEpithelialCells4.2
CD105+_Endothelial4.45
CD14+_Monocytes4.4
CD19+_BCells(neg._sel.)4.45
CD33+_Myeloid5.4
CD34+5.45
CD4+_Tcells4.45
CD56+_NKCells4.9
CD71+_EarlyErythroid3.85
CD8+_Tcells4.05
CardiacMyocytes5.15
Caudatenucleus3.95
Cerebellum3.35
CerebellumPeduncles4.75
CiliaryGanglion2.85
CingulateCortex5.05
Colorectaladenocarcinoma5.85
DorsalRootGanglion3.1
FetalThyroid4.3
Fetalbrain4.25
Fetalliver3.45
Fetallung3.5
GlobusPallidus3.75
Heart7.85
Hypothalamus4.65
Kidney3.35
Leukemia_chronicMyelogenousK-5623.75
Leukemia_promyelocytic-HL-603.75
Leukemialymphoblastic(MOLT-4)3.45
Liver5.4
Lung5.25
Lymphnode3.5
Lymphoma_burkitts(Daudi)5.3
Lymphoma_burkitts(Raji)5.75
MedullaOblongata4.15
OccipitalLobe5.6
OlfactoryBulb3.3
Ovary2.7
Pancreas3.2
PancreaticIslet4.4
ParietalLobe4.4
Pituitary4.85
Placenta4.4
Pons4.1
PrefrontalCortex11.2
Prostate5.05
Salivarygland3.2
SkeletalMuscle4.6
Skin3.1
SmoothMuscle4.8
Spinalcord5.35
SubthalamicNucleus5.45
SuperiorCervicalGanglion4.55
TemporalLobe5.4
Testis5.6
TestisGermCell9.9
TestisIntersitial5
TestisLeydigCell4.1
TestisSeminiferousTubule3.6
Thalamus5.8
Thymus3.3
Thyroid5.35
Tongue4
Tonsil4
Trachea3.4
TrigeminalGanglion3.95
Uterus3.4
UterusCorpus3.65
WholeBlood4.5
Wholebrain25.55
colon4.2
pineal_day8.44
pineal_night9.24
retina5.125
small_intestine4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_8842_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.49 ± 0.47
Basal Forebrain5.44 ± 0.51
Basal Part of Pons5.3 ± 0.42
Cerebellar Cortex5.22 ± 0.36
Cerebellar Nuclei4.61 ± 0.5
Claustrum4.92 ± 0.52
Epithalamus5.29 ± 0.31
Frontal Lobe5.52 ± 0.41
Globus Pallidus5.08 ± 0.47
Hypothalamus5.38 ± 0.34
Insula5.53 ± 0.35
Limbic Lobe5.44 ± 0.32
Mesencephalon5.29 ± 0.44
Myelencephalon5.34 ± 0.48
Occipital Lobe4.96 ± 0.35
Parietal Lobe5.31 ± 0.37
Pontine Tegmentum5.35 ± 0.51
Striatum5.22 ± 0.37
Subthalamus5.04 ± 0.14
Temporal Lobe5.51 ± 0.39
Thalamus5.32 ± 0.43
White Matter4.99 ± 0.52
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00028479 19 252 270 VMLPGQCQYLGLPVADYFK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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