AutismKB 2.0

Annotation Detail for FASTKD3


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Basic Information Top
Gene Symbol:FASTKD3 ( FLJ23274,MGC142123,MGC5297 )
Gene Full Name: FAST kinase domains 3
Band: 5p15.31
Quick LinksEntrez ID:79072; OMIM: NA; Uniprot ID:FAKD3_HUMAN; ENSEMBL ID: ENSG00000124279; HGNC ID: 28758
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst1 / 6231916
fetus11 / 56401219
neonate2 / 3109764
infant0 / 236200 
juvenile2 / 5555635
adult24 / 193912112
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor11 / 26384541
glioma1 / 1068839
head and neck tumor0 / 1363020 
kidney tumor2 / 6895929
leukemia2 / 9584220
liver tumor2 / 9635920
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal45 / 336030713
ovarian tumor0 / 766820 
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer2 / 10268019
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder2 / 2975767
blood4 / 12347832
bone1 / 7165513
bone marrow0 / 488010 
brain16 / 110098914
cervix1 / 4817120
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus0 / 202090 
eye0 / 2110540 
heart2 / 8962622
intestine2 / 2344728
kidney7 / 21177733
larynx0 / 241450 
liver6 / 20774328
lung0 / 3369740 
lymph0 / 442700 
lymph node2 / 9161021
mammary gland0 / 1532710 
mouth0 / 670520 
muscle3 / 10771527
nerve0 / 157680 
ovary0 / 1020510 
pancreas5 / 21481223
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta3 / 28082510
prostate3 / 18934515
salivary gland0 / 201550 
skin4 / 21057418
spleen0 / 539520 
stomach2 / 9661920
testis7 / 33044221
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord1 / 1368073
uterus3 / 23287812
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219200_at
Cell line Expression level Expression bar
721_B_lymphoblasts49.8
Adipocyte8.5
AdrenalCortex10.5
Adrenalgland8.65
Amygdala12.55
Appendix12
AtrioventricularNode9
BDCA4+_DentriticCells25.05
Bonemarrow9.35
BronchialEpithelialCells17.45
CD105+_Endothelial37.4
CD14+_Monocytes9.75
CD19+_BCells(neg._sel.)15.85
CD33+_Myeloid13.9
CD34+26.55
CD4+_Tcells13.5
CD56+_NKCells16.55
CD71+_EarlyErythroid8.45
CD8+_Tcells16.35
CardiacMyocytes14.7
Caudatenucleus9.7
Cerebellum7.2
CerebellumPeduncles12.4
CiliaryGanglion8.85
CingulateCortex9.15
Colorectaladenocarcinoma10.8
DorsalRootGanglion8.45
FetalThyroid9.6
Fetalbrain8.35
Fetalliver10.65
Fetallung6.25
GlobusPallidus7.6
Heart12.9
Hypothalamus11.6
Kidney9.15
Leukemia_chronicMyelogenousK-56221.9
Leukemia_promyelocytic-HL-6031
Leukemialymphoblastic(MOLT-4)17.15
Liver13.9
Lung9.15
Lymphnode11.85
Lymphoma_burkitts(Daudi)30.45
Lymphoma_burkitts(Raji)14.3
MedullaOblongata8.55
OccipitalLobe10.7
OlfactoryBulb6.35
Ovary8.3
Pancreas8
PancreaticIslet10.05
ParietalLobe10.2
Pituitary11.2
Placenta7.85
Pons11.65
PrefrontalCortex19.4
Prostate13.4
Salivarygland7.75
SkeletalMuscle17.25
Skin9.75
SmoothMuscle11.85
Spinalcord10.5
SubthalamicNucleus9.15
SuperiorCervicalGanglion15.25
TemporalLobe9.05
Testis7.4
TestisGermCell6.55
TestisIntersitial7.4
TestisLeydigCell8.95
TestisSeminiferousTubule7.55
Thalamus9.25
Thymus9.6
Thyroid17.5
Tongue10.2
Tonsil11.85
Trachea7.05
TrigeminalGanglion10
Uterus11.95
UterusCorpus10.9
WholeBlood19.7
Wholebrain7.65
colon13.4
pineal_day11.96
pineal_night11.62
retina10.95
small_intestine16.5
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_1520_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.62 ± 1.03
Basal Forebrain2.12 ± 0.21
Basal Part of Pons1.87 ± 0.44
Cerebellar Cortex1.98 ± 0.73
Cerebellar Nuclei2.56 ± 0.69
Claustrum2.97 ± 0.82
Epithalamus1.86 ± 0.69
Frontal Lobe2.02 ± 0.7
Globus Pallidus2.66 ± 0.32
Hypothalamus2.19 ± 0.65
Insula1.96 ± 0.45
Limbic Lobe2.18 ± 0.71
Mesencephalon2.34 ± 0.65
Myelencephalon2.17 ± 0.65
Occipital Lobe2.19 ± 0.43
Parietal Lobe2.17 ± 0.7
Pontine Tegmentum2.2 ± 0.7
Striatum2.24 ± 0.52
Subthalamus2.31 ± 0.59
Temporal Lobe2.03 ± 0.66
Thalamus2.1 ± 0.6
White Matter2.72 ± 0.15
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Fastkd3CBCerebellum13.37
14.17
Fastkd3CTXCerebral cortex5.51
4.12
Fastkd3HIPHippocampal region9.45
9.67
Fastkd3HPFHippocampal formation6.55
6.25
Fastkd3HYHypothalamus1.9
1.69
Fastkd3LSXLateral septal complex1.34
1.19
Fastkd3MBMidbrain2.9
2.91
Fastkd3MYMedulla10.72
11.59
Fastkd3OLFOlfactory bulb20.43
18.03
Fastkd3PPons4.01
4.49
Fastkd3PALPallidum2.31
1.82
Fastkd3RHPRetrohippocampal region1.16
1.2
Fastkd3sAMYStriatum-like amygdalar nuclei6.42
4.45
Fastkd3STRStriatum3.75
2.78
Fastkd3STRdStriatum dorsal region3.49
2.7
Fastkd3STRvStriatum ventral region4.76
3.16
Fastkd3THThalamus4.24
3.71
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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