AutismKB 2.0

Annotation Detail for ZNF426


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Basic Information Top
Gene Symbol:ZNF426 ( MGC2663 )
Gene Full Name: zinc finger protein 426
Band: 19p13.2
Quick LinksEntrez ID:79088; OMIM: NA; Uniprot ID:ZN426_HUMAN; ENSEMBL ID: ENSG00000130818; HGNC ID: 20725
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus8 / 56401214
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult18 / 19391219
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma2 / 17475114
breast (mammary gland) tumor1 / 9417810
cervical tumor1 / 3436629
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor2 / 17290115
gastrointestinal tumor4 / 11936933
germ cell tumor6 / 26384522
glioma1 / 1068839
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor10 / 96359103
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal24 / 33603077
ovarian tumor2 / 7668226
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites3 / 4001574
bladder3 / 29757100
blood3 / 12347824
bone0 / 716550 
bone marrow0 / 488010 
brain8 / 11009897
cervix1 / 4817120
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue4 / 21572218
esophagus2 / 2020998
eye0 / 2110540 
heart0 / 896260 
intestine3 / 23447212
kidney2 / 2117779
larynx0 / 241450 
liver11 / 20774352
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland2 / 15327113
mouth1 / 6705214
muscle2 / 10771518
nerve0 / 157680 
ovary2 / 10205119
pancreas3 / 21481213
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta1 / 2808253
prostate0 / 1893450 
salivary gland0 / 201550 
skin1 / 2105744
spleen0 / 539520 
stomach0 / 966190 
testis5 / 33044215
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205964_at
Cell line Expression level Expression bar
721_B_lymphoblasts13.4
Adipocyte11.9
AdrenalCortex22.85
Adrenalgland12.4
Amygdala10.7
Appendix19.05
AtrioventricularNode20.05
BDCA4+_DentriticCells10.65
Bonemarrow15.7
BronchialEpithelialCells11.05
CD105+_Endothelial14.6
CD14+_Monocytes13.65
CD19+_BCells(neg._sel.)12.4
CD33+_Myeloid18
CD34+17.8
CD4+_Tcells14.1
CD56+_NKCells13.4
CD71+_EarlyErythroid12.35
CD8+_Tcells10.75
CardiacMyocytes31.75
Caudatenucleus11.15
Cerebellum10.15
CerebellumPeduncles17.8
CiliaryGanglion18.4
CingulateCortex14
Colorectaladenocarcinoma11.95
DorsalRootGanglion15.65
FetalThyroid13.05
Fetalbrain11.15
Fetalliver11
Fetallung7.9
GlobusPallidus13.2
Heart27.45
Hypothalamus11.55
Kidney13.3
Leukemia_chronicMyelogenousK-56210.6
Leukemia_promyelocytic-HL-6010.35
Leukemialymphoblastic(MOLT-4)9.95
Liver22.9
Lung13.15
Lymphnode9.75
Lymphoma_burkitts(Daudi)16.55
Lymphoma_burkitts(Raji)21.05
MedullaOblongata10.5
OccipitalLobe11
OlfactoryBulb9.7
Ovary11.3
Pancreas11.55
PancreaticIslet15.45
ParietalLobe16.5
Pituitary13.9
Placenta10.4
Pons13.55
PrefrontalCortex14.75
Prostate15.15
Salivarygland11.15
SkeletalMuscle29.5
Skin17
SmoothMuscle14.6
Spinalcord12.9
SubthalamicNucleus13.7
SuperiorCervicalGanglion26.65
TemporalLobe12.25
Testis10.05
TestisGermCell8.3
TestisIntersitial11.6
TestisLeydigCell14.25
TestisSeminiferousTubule11.05
Thalamus13.45
Thymus9.2
Thyroid12.9
Tongue19.85
Tonsil12.75
Trachea10.4
TrigeminalGanglion21.1
Uterus10.55
UterusCorpus15
WholeBlood13.15
Wholebrain9.4
colon11.25
pineal_day14.06
pineal_night13.68
retina14.175
small_intestine10.5
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_1293_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.83 ± 0.43
Basal Forebrain5.05 ± 0.4
Basal Part of Pons4.81 ± 0.39
Cerebellar Cortex5.14 ± 0.34
Cerebellar Nuclei4.75 ± 0.36
Claustrum4.65 ± 0.58
Epithalamus5.41 ± 0.4
Frontal Lobe4.84 ± 0.41
Globus Pallidus5.12 ± 0.44
Hypothalamus4.94 ± 0.47
Insula4.65 ± 0.51
Limbic Lobe4.73 ± 0.46
Mesencephalon4.89 ± 0.45
Myelencephalon4.8 ± 0.49
Occipital Lobe4.7 ± 0.47
Parietal Lobe4.82 ± 0.49
Pontine Tegmentum4.82 ± 0.51
Striatum4.86 ± 0.47
Subthalamus5.03 ± 0.41
Temporal Lobe4.84 ± 0.41
Thalamus4.79 ± 0.48
White Matter5.69 ± 0.18
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Zfp426CBCerebellum2.03
3.17
Zfp426CTXCerebral cortex3.62
3.02
Zfp426HIPHippocampal region4.31
3.98
Zfp426HPFHippocampal formation3.19
2.73
Zfp426HYHypothalamus0.65
0.59
Zfp426LSXLateral septal complex0.07
0.04
Zfp426MBMidbrain1.33
2.39
Zfp426MYMedulla0.73
1.02
Zfp426OLFOlfactory bulb2.03
2.88
Zfp426PPons0.86
1.38
Zfp426PALPallidum1.08
1.21
Zfp426RHPRetrohippocampal region1.04
0.75
Zfp426sAMYStriatum-like amygdalar nuclei0.56
0.98
Zfp426STRStriatum0.26
0.3
Zfp426STRdStriatum dorsal region0.17
0.19
Zfp426STRvStriatum ventral region0.48
0.47
Zfp426THThalamus1.34
1.06
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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