AutismKB 2.0

Annotation Detail for C16orf68


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Basic Information Top
Gene Symbol:C16orf68 ( FLJ12433,MGC2654 )
Gene Full Name: chromosome 16 open reading frame 68
Band: 16p13.2
Quick LinksEntrez ID:79091; OMIM: NA; Uniprot ID:CP068_HUMAN; ENSEMBL ID: ENSG00000067365; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst8 / 62319128
fetus16 / 56401228
neonate0 / 310970 
infant3 / 23620127
juvenile1 / 5555617
adult59 / 193912130
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor1 / 3436629
chondrosarcoma6 / 8282372
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor8 / 26384530
glioma7 / 10688365
head and neck tumor6 / 13630244
kidney tumor0 / 689590 
leukemia8 / 9584283
liver tumor2 / 9635920
lung tumor2 / 10312719
lymphoma0 / 717550 
non-neoplasia4 / 9725041
normal94 / 336030727
ovarian tumor4 / 7668252
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS9 / 12568071
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor15 / 124949120
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites1 / 4001524
bladder0 / 297570 
blood6 / 12347848
bone5 / 7165569
bone marrow1 / 4880120
brain42 / 110098938
cervix2 / 4817141
connective tissue5 / 14925533
ear0 / 162120 
embryonic tissue12 / 21572255
esophagus0 / 202090 
eye8 / 21105437
heart0 / 896260 
intestine3 / 23447212
kidney3 / 21177714
larynx1 / 2414541
liver5 / 20774324
lung8 / 33697423
lymph0 / 442700 
lymph node2 / 9161021
mammary gland0 / 1532710 
mouth2 / 6705229
muscle4 / 10771537
nerve0 / 157680 
ovary5 / 10205148
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx2 / 4132848
pituitary gland0 / 165850 
placenta6 / 28082521
prostate3 / 18934515
salivary gland1 / 2015549
skin16 / 21057475
spleen0 / 539520 
stomach0 / 966190 
testis15 / 33044245
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus7 / 23287830
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218945_at
Cell line Expression level Expression bar
721_B_lymphoblasts16.85
Adipocyte5.15
AdrenalCortex5.45
Adrenalgland4.4
Amygdala5.2
Appendix5.2
AtrioventricularNode3.9
BDCA4+_DentriticCells6.9
Bonemarrow5.1
BronchialEpithelialCells7.9
CD105+_Endothelial7.1
CD14+_Monocytes21.1
CD19+_BCells(neg._sel.)6.15
CD33+_Myeloid21.1
CD34+8.85
CD4+_Tcells6.15
CD56+_NKCells6.35
CD71+_EarlyErythroid7.6
CD8+_Tcells5.15
CardiacMyocytes6.65
Caudatenucleus4.65
Cerebellum4.2
CerebellumPeduncles5.85
CiliaryGanglion3.65
CingulateCortex5.4
Colorectaladenocarcinoma5.25
DorsalRootGanglion4
FetalThyroid5.15
Fetalbrain5.25
Fetalliver4.5
Fetallung5.75
GlobusPallidus3.8
Heart63.55
Hypothalamus5.7
Kidney4.15
Leukemia_chronicMyelogenousK-5625.75
Leukemia_promyelocytic-HL-606.7
Leukemialymphoblastic(MOLT-4)7.15
Liver6.85
Lung5.75
Lymphnode4.5
Lymphoma_burkitts(Daudi)7.15
Lymphoma_burkitts(Raji)12.2
MedullaOblongata4.75
OccipitalLobe4.5
OlfactoryBulb4.15
Ovary3.45
Pancreas4.2
PancreaticIslet5.45
ParietalLobe5.4
Pituitary6.05
Placenta5.3
Pons4.9
PrefrontalCortex6.6
Prostate6.35
Salivarygland5.5
SkeletalMuscle6.05
Skin3.95
SmoothMuscle9.6
Spinalcord5.55
SubthalamicNucleus4.75
SuperiorCervicalGanglion5.85
TemporalLobe4.6
Testis77.65
TestisGermCell58.85
TestisIntersitial37.8
TestisLeydigCell6.7
TestisSeminiferousTubule13.9
Thalamus5.25
Thymus4.5
Thyroid6.6
Tongue5.3
Tonsil4.95
Trachea4.35
TrigeminalGanglion5.1
Uterus7.3
UterusCorpus4.95
WholeBlood5.8
Wholebrain4.9
colon5.25
pineal_day6.54
pineal_night6.4
retina6.3
small_intestine5.05
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P3885
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.63 ± 0.84
Basal Forebrain3.31 ± 0.57
Basal Part of Pons3.8 ± 0.76
Cerebellar Cortex4.04 ± 0.52
Cerebellar Nuclei3.69 ± 0.46
Claustrum3.69 ± 0.89
Epithalamus3.36 ± 0.65
Frontal Lobe3.55 ± 0.65
Globus Pallidus3.43 ± 0.42
Hypothalamus3.37 ± 0.61
Insula3.36 ± 0.55
Limbic Lobe3.49 ± 0.68
Mesencephalon3.53 ± 0.67
Myelencephalon3.47 ± 0.64
Occipital Lobe3.31 ± 0.7
Parietal Lobe3.51 ± 0.69
Pontine Tegmentum3.62 ± 0.72
Striatum3.21 ± 0.79
Subthalamus3.38 ± 0.83
Temporal Lobe3.65 ± 0.67
Thalamus3.53 ± 0.66
White Matter3.57 ± 0.46
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
BC024814CBCerebellum0.05
0.23
BC024814CTXCerebral cortex0.11
0.14
BC024814HIPHippocampal region0.31
0.36
BC024814HPFHippocampal formation0.25
0.3
BC024814HYHypothalamus0.2
0.26
BC024814LSXLateral septal complex0
0
BC024814MBMidbrain0.08
0.24
BC024814MYMedulla0.08
0.85
BC024814OLFOlfactory bulb0.8
1.19
BC024814PPons0.2
0.58
BC024814PALPallidum0.31
0.48
BC024814RHPRetrohippocampal region0.1
0.1
BC024814sAMYStriatum-like amygdalar nuclei0.03
0
BC024814STRStriatum0.14
0.12
BC024814STRdStriatum dorsal region0.14
0.13
BC024814STRvStriatum ventral region0.3
0.17
BC024814THThalamus0.15
0.12
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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