AutismKB 2.0

Annotation Detail for LILRA6


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Basic Information Top
Gene Symbol:LILRA6 ( CD85b,ILT5,ILT8,LILRB3,LILRB6 )
Gene Full Name: leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
Band: 19q13.42
Quick LinksEntrez ID:79168; OMIM: NA; Uniprot ID:LIRA6_HUMAN; ENSEMBL ID: ENSG00000204577,ENSG00000244482; HGNC ID: 15495
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus6 / 56401210
neonate8 / 31097257
infant0 / 236200 
juvenile0 / 555560 
adult17 / 19391218
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor2 / 9417821
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor1 / 2638453
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia2 / 9584220
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia2 / 9725020
normal57 / 336030716
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites0 / 400150 
bladder1 / 2975733
blood22 / 123478178
bone0 / 716550 
bone marrow0 / 488010 
brain2 / 11009891
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart1 / 8962611
intestine2 / 2344728
kidney0 / 2117770 
larynx1 / 2414541
liver2 / 2077439
lung5 / 33697414
lymph0 / 442700 
lymph node0 / 916100 
mammary gland2 / 15327113
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta3 / 28082510
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen15 / 53952278
stomach0 / 966190 
testis1 / 3304423
thymus4 / 8113149
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 208594_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts4.4
Adipocyte3.45
AdrenalCortex3.6
Adrenalgland2.9
Amygdala3.7
Appendix3.5
AtrioventricularNode2.6
BDCA4+_DentriticCells47.05
Bonemarrow8.1
BronchialEpithelialCells3.45
CD105+_Endothelial3.55
CD14+_Monocytes434.95
CD19+_BCells(neg._sel.)3.8
CD33+_Myeloid403.55
CD34+5.35
CD4+_Tcells3.8
CD56+_NKCells9.55
CD71+_EarlyErythroid3.25
CD8+_Tcells3.4
CardiacMyocytes4.55
Caudatenucleus3.15
Cerebellum2.8
CerebellumPeduncles3.95
CiliaryGanglion2.45
CingulateCortex3.55
Colorectaladenocarcinoma3.5
DorsalRootGanglion2.6
FetalThyroid3.4
Fetalbrain3.5
Fetalliver3
Fetallung3.25
GlobusPallidus2.5
Heart4.4
Hypothalamus3.85
Kidney2.8
Leukemia_chronicMyelogenousK-5623.15
Leukemia_promyelocytic-HL-603.1
Leukemialymphoblastic(MOLT-4)2.8
Liver4.6
Lung3.9
Lymphnode3.05
Lymphoma_burkitts(Daudi)4.6
Lymphoma_burkitts(Raji)4.85
MedullaOblongata3.25
OccipitalLobe3.15
OlfactoryBulb2.75
Ovary2.3
Pancreas2.8
PancreaticIslet3.75
ParietalLobe3.65
Pituitary4.1
Placenta3.65
Pons3.3
PrefrontalCortex4.4
Prostate4.1
Salivarygland2.8
SkeletalMuscle4.05
Skin2.65
SmoothMuscle4
Spinalcord3.75
SubthalamicNucleus3.2
SuperiorCervicalGanglion3.9
TemporalLobe3.2
Testis3
TestisGermCell2.95
TestisIntersitial2.95
TestisLeydigCell3.45
TestisSeminiferousTubule2.95
Thalamus3.55
Thymus2.8
Thyroid4.4
Tongue3.4
Tonsil3.4
Trachea2.9
TrigeminalGanglion3.4
Uterus2.9
UterusCorpus3.1
WholeBlood217.75
Wholebrain3.05
colon3.5
pineal_day4.38
pineal_night4.28
retina4.25
small_intestine3.4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_310_PI417507815
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.13 ± 0.45
Basal Forebrain5.17 ± 0.26
Basal Part of Pons5.15 ± 0.28
Cerebellar Cortex4.84 ± 0.39
Cerebellar Nuclei5.28 ± 0.35
Claustrum5.59 ± 0.59
Epithalamus4.66 ± 0.44
Frontal Lobe5.13 ± 0.5
Globus Pallidus5.57 ± 0.38
Hypothalamus4.97 ± 0.44
Insula5 ± 0.52
Limbic Lobe5.2 ± 0.53
Mesencephalon5.24 ± 0.49
Myelencephalon5.2 ± 0.53
Occipital Lobe5.17 ± 0.52
Parietal Lobe5.15 ± 0.45
Pontine Tegmentum5.01 ± 0.4
Striatum5.36 ± 0.46
Subthalamus5.14 ± 0.29
Temporal Lobe5.05 ± 0.57
Thalamus5.3 ± 0.44
White Matter5.23 ± 0.12
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00039206 19 377 395 YQAEFPMSPVTSAHAGTYR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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