AutismKB 2.0

Annotation Detail for ZBED2


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Basic Information Top
Gene Symbol:ZBED2 ( MGC10796 )
Gene Full Name: zinc finger, BED-type containing 2
Band: 3q13.13
Quick LinksEntrez ID:79413; OMIM: NA; Uniprot ID:ZBED2_HUMAN; ENSEMBL ID: ENSG00000177494; HGNC ID: 20710
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus2 / 5640123
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult11 / 19391215
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor2 / 13630214
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia2 / 9725020
normal13 / 33603073
ovarian tumor4 / 7668252
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye1 / 2110544
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx1 / 2414541
liver0 / 2077430 
lung5 / 33697414
lymph0 / 442700 
lymph node6 / 9161065
mammary gland0 / 1532710 
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary4 / 10205139
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta1 / 2808253
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach1 / 9661910
testis0 / 3304420 
thymus1 / 8113112
thyroid2 / 4747342
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219836_at
Cell line Expression level Expression bar
721_B_lymphoblasts4.4
Adipocyte3.5
AdrenalCortex3.85
Adrenalgland3
Amygdala3.75
Appendix3.65
AtrioventricularNode2.7
BDCA4+_DentriticCells3.95
Bonemarrow3.5
BronchialEpithelialCells161.65
CD105+_Endothelial3.6
CD14+_Monocytes3.8
CD19+_BCells(neg._sel.)3.75
CD33+_Myeloid4.6
CD34+4.5
CD4+_Tcells3.8
CD56+_NKCells4.3
CD71+_EarlyErythroid3.35
CD8+_Tcells3.4
CardiacMyocytes4.5
Caudatenucleus3.15
Cerebellum2.9
CerebellumPeduncles4.05
CiliaryGanglion2.5
CingulateCortex3.6
Colorectaladenocarcinoma3.6
DorsalRootGanglion2.7
FetalThyroid13.75
Fetalbrain3.6
Fetalliver3.05
Fetallung2.95
GlobusPallidus2.65
Heart4.65
Hypothalamus3.85
Kidney2.9
Leukemia_chronicMyelogenousK-5623.25
Leukemia_promyelocytic-HL-603.1
Leukemialymphoblastic(MOLT-4)2.85
Liver4.7
Lung10.5
Lymphnode3.05
Lymphoma_burkitts(Daudi)4.55
Lymphoma_burkitts(Raji)4.9
MedullaOblongata3.25
OccipitalLobe3.2
OlfactoryBulb2.8
Ovary2.35
Pancreas2.8
PancreaticIslet3.8
ParietalLobe3.75
Pituitary4.15
Placenta3.7
Pons3.4
PrefrontalCortex4.45
Prostate4.2
Salivarygland2.8
SkeletalMuscle4.25
Skin2.75
SmoothMuscle4
Spinalcord3.8
SubthalamicNucleus3.2
SuperiorCervicalGanglion4
TemporalLobe3.25
Testis3.1
TestisGermCell3
TestisIntersitial2.95
TestisLeydigCell3.55
TestisSeminiferousTubule3.05
Thalamus3.6
Thymus96.55
Thyroid202.4
Tongue4.3
Tonsil8.05
Trachea3
TrigeminalGanglion3.55
Uterus2.9
UterusCorpus3.15
WholeBlood3.9
Wholebrain2.95
colon3.6
pineal_day4.44
pineal_night4.32
retina4.275
small_intestine3.45
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_13_PI416383280
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala1.94 ± 1.05
Basal Forebrain1.63 ± 0.33
Basal Part of Pons1.3 ± 0.45
Cerebellar Cortex1.18 ± 0.39
Cerebellar Nuclei1.78 ± 0.78
Claustrum2.42 ± 0.85
Epithalamus1.24 ± 0.82
Frontal Lobe1.33 ± 0.56
Globus Pallidus1.8 ± 0.28
Hypothalamus1.7 ± 0.79
Insula1.33 ± 0.38
Limbic Lobe1.56 ± 0.84
Mesencephalon1.73 ± 0.78
Myelencephalon1.55 ± 0.76
Occipital Lobe1.49 ± 0.6
Parietal Lobe1.54 ± 0.73
Pontine Tegmentum1.65 ± 0.78
Striatum2.76 ± 1.34
Subthalamus1.67 ± 0.69
Temporal Lobe1.36 ± 0.47
Thalamus1.52 ± 0.61
White Matter1.78 ± 0.25
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018