AutismKB 2.0

Annotation Detail for CORO7


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Basic Information Top
Gene Symbol:CORO7 ( 0610011B16Rik,CRN7,FLJ22021,FLJ44188,POD1 )
Gene Full Name: coronin 7
Band: 16p13.3
Quick LinksEntrez ID:79585; OMIM: 611668; Uniprot ID:CORO7_HUMAN; ENSEMBL ID: ENSG00000103426; HGNC ID: 26161
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst4 / 6231964
fetus65 / 564012115
neonate1 / 3109732
infant0 / 236200 
juvenile2 / 5555635
adult97 / 193912150
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor30 / 263845113
glioma7 / 10688365
head and neck tumor9 / 13630266
kidney tumor4 / 6895958
leukemia12 / 95842125
liver tumor2 / 9635920
lung tumor1 / 1031279
lymphoma9 / 71755125
non-neoplasia13 / 97250133
normal372 / 3360307110
ovarian tumor0 / 766820 
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS7 / 12568055
prostate cancer1 / 1026809
retinoblastoma1 / 4635621
skin tumor4 / 12494932
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder2 / 2975767
blood6 / 12347848
bone0 / 716550 
bone marrow5 / 48801102
brain237 / 1100989215
cervix0 / 481710 
connective tissue9 / 14925560
ear0 / 162120 
embryonic tissue14 / 21572264
esophagus0 / 202090 
eye3 / 21105414
heart1 / 8962611
intestine7 / 23447229
kidney11 / 21177751
larynx0 / 241450 
liver2 / 2077439
lung45 / 336974133
lymph9 / 44270203
lymph node7 / 9161076
mammary gland0 / 1532710 
mouth9 / 67052134
muscle2 / 10771518
nerve0 / 157680 
ovary3 / 10205129
pancreas4 / 21481218
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta22 / 28082578
prostate4 / 18934521
salivary gland1 / 2015549
skin4 / 21057418
spleen15 / 53952278
stomach0 / 966190 
testis69 / 330442208
thymus46 / 81131566
thyroid0 / 474730 
tonsil0 / 169990 
trachea25 / 52413476
umbilical cord0 / 136800 
uterus22 / 23287894
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219040_at
Cell line Expression level Expression bar
721_B_lymphoblasts82.85
Adipocyte20.55
AdrenalCortex21.25
Adrenalgland19.2
Amygdala21.85
Appendix16.75
AtrioventricularNode16.3
BDCA4+_DentriticCells37.6
Bonemarrow21.1
BronchialEpithelialCells12.6
CD105+_Endothelial18.5
CD14+_Monocytes80.7
CD19+_BCells(neg._sel.)24.35
CD33+_Myeloid72.7
CD34+28
CD4+_Tcells100.8
CD56+_NKCells80.95
CD71+_EarlyErythroid20.15
CD8+_Tcells66.65
CardiacMyocytes19.2
Caudatenucleus28.5
Cerebellum18
CerebellumPeduncles31.1
CiliaryGanglion26.6
CingulateCortex24.4
Colorectaladenocarcinoma11.6
DorsalRootGanglion16.15
FetalThyroid18.1
Fetalbrain23.95
Fetalliver14.45
Fetallung17.5
GlobusPallidus15.3
Heart23.45
Hypothalamus22.85
Kidney17.85
Leukemia_chronicMyelogenousK-56224
Leukemia_promyelocytic-HL-6027.3
Leukemialymphoblastic(MOLT-4)22.75
Liver19.4
Lung20.8
Lymphnode19.65
Lymphoma_burkitts(Daudi)36
Lymphoma_burkitts(Raji)36.15
MedullaOblongata21.15
OccipitalLobe19
OlfactoryBulb14.9
Ovary19.85
Pancreas15.05
PancreaticIslet23.55
ParietalLobe26.3
Pituitary24.5
Placenta22.2
Pons24.4
PrefrontalCortex24.6
Prostate16.35
Salivarygland16.75
SkeletalMuscle23.05
Skin16.75
SmoothMuscle13.45
Spinalcord22.45
SubthalamicNucleus23.75
SuperiorCervicalGanglion13.8
TemporalLobe20.45
Testis18.3
TestisGermCell18.25
TestisIntersitial12.2
TestisLeydigCell20.3
TestisSeminiferousTubule18.1
Thalamus21.45
Thymus17
Thyroid15.5
Tongue20.55
Tonsil23.2
Trachea21.55
TrigeminalGanglion19.9
Uterus7.05
UterusCorpus8.85
WholeBlood68.5
Wholebrain17.85
colon7.55
pineal_day21.96
pineal_night20.5
retina18.775
small_intestine7.8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6909_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.03 ± 0.81
Basal Forebrain3.85 ± 0.57
Basal Part of Pons4.17 ± 0.45
Cerebellar Cortex3.72 ± 0.48
Cerebellar Nuclei4 ± 0.66
Claustrum4.17 ± 0.57
Epithalamus3.55 ± 0.45
Frontal Lobe3.96 ± 0.53
Globus Pallidus4.72 ± 0.41
Hypothalamus3.55 ± 0.44
Insula3.65 ± 0.32
Limbic Lobe3.96 ± 0.59
Mesencephalon4.04 ± 0.59
Myelencephalon3.99 ± 0.59
Occipital Lobe3.77 ± 0.74
Parietal Lobe4.07 ± 0.52
Pontine Tegmentum3.91 ± 0.58
Striatum4.43 ± 0.5
Subthalamus4.26 ± 0.31
Temporal Lobe3.91 ± 0.5
Thalamus3.93 ± 0.58
White Matter5.38 ± 0.38
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Coro7CBCerebellum27.02
30.97
Coro7CTXCerebral cortex92.44
69.22
Coro7HIPHippocampal region55.64
88.33
Coro7HPFHippocampal formation64.98
77.44
Coro7HYHypothalamus25.17
18.58
Coro7LSXLateral septal complex78.11
65.37
Coro7MBMidbrain42.07
35.64
Coro7MYMedulla37.12
37.02
Coro7OLFOlfactory bulb97.94
98.14
Coro7PPons37.69
35.16
Coro7PALPallidum41.99
35.66
Coro7RHPRetrohippocampal region81.31
65.65
Coro7sAMYStriatum-like amygdalar nuclei44.35
31.44
Coro7STRStriatum100
91.55
Coro7STRdStriatum dorsal region100
100
Coro7STRvStriatum ventral region100
89.14
Coro7THThalamus71.65
59.96
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
CORO7_HUMAN_0 0 0 0 SGPEPLQEGPGPK PRIDE
CORO7_HUMAN_0 0 0 0 VAVPLLSSGGQVAVLELR PRIDE
CORO7_HUMAN_0 0 0 0 VLQLSDTAIVPIGYHVPR PRIDE
CORO7_HUMAN_0 0 0 0 VPAEGLEEVLTTPETVLTGHTEK PRIDE
CORO7_HUMAN_217 19 217 235 LAWMGTWEHLVSTGFNQMR PRIDE
CORO7_HUMAN_329 18 329 346 VLQLSDTAIVPIGYHVPR PRIDE
CORO7_HUMAN_510 18 510 527 VAVPLLSSGGQVAVLELR PRIDE
CORO7_HUMAN_573 23 573 595 VPAEGLEEVLTTPETVLTGHTEK PRIDE
CORO7_HUMAN_667 13 667 679 SGPEPLQEGPGPK PRIDE
PAp00009573 13 695 707 CLLVSGFDSQSER Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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