AutismKB 2.0

Annotation Detail for ARSJ


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Basic Information Top
Gene Symbol:ARSJ ( FLJ23548 )
Gene Full Name: arylsulfatase family, member J
Band: 4q26
Quick LinksEntrez ID:79642; OMIM: 610010; Uniprot ID:ARSJ_HUMAN; ENSEMBL ID: ENSG00000180801; HGNC ID: 26286
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst0 / 623190 
fetus0 / 5640120 
neonate3 / 3109796
infant0 / 236200 
juvenile0 / 555560 
adult28 / 193912114
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor1 / 3436629
chondrosarcoma7 / 8282384
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor6 / 26384522
glioma1 / 1068839
head and neck tumor2 / 13630214
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal59 / 336030717
ovarian tumor0 / 766820 
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer3 / 10268029
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone1 / 7165513
bone marrow0 / 488010 
brain17 / 110098915
cervix1 / 4817120
connective tissue11 / 14925573
ear0 / 162120 
embryonic tissue4 / 21572218
esophagus0 / 202090 
eye1 / 2110544
heart0 / 896260 
intestine0 / 2344720 
kidney9 / 21177742
larynx0 / 241450 
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth2 / 6705229
muscle4 / 10771537
nerve0 / 157680 
ovary0 / 1020510 
pancreas5 / 21481223
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta6 / 28082521
prostate6 / 18934531
salivary gland0 / 201550 
skin9 / 21057442
spleen0 / 539520 
stomach0 / 966190 
testis6 / 33044218
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular5 / 5178096
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219973_at
Cell line Expression level Expression bar
721_B_lymphoblasts9.25
Adipocyte9.3
AdrenalCortex12.7
Adrenalgland8.7
Amygdala8.95
Appendix13.85
AtrioventricularNode15.85
BDCA4+_DentriticCells8.6
Bonemarrow10.3
BronchialEpithelialCells10.15
CD105+_Endothelial9.5
CD14+_Monocytes10.55
CD19+_BCells(neg._sel.)9.95
CD33+_Myeloid11.15
CD34+10.75
CD4+_Tcells9.1
CD56+_NKCells9.8
CD71+_EarlyErythroid9.35
CD8+_Tcells7.75
CardiacMyocytes13.9
Caudatenucleus9
Cerebellum8.05
CerebellumPeduncles11.95
CiliaryGanglion11.75
CingulateCortex10.8
Colorectaladenocarcinoma9.6
DorsalRootGanglion10.35
FetalThyroid10.75
Fetalbrain9.15
Fetalliver8.95
Fetallung8.05
GlobusPallidus8.75
Heart14.05
Hypothalamus9.45
Kidney9.85
Leukemia_chronicMyelogenousK-5628.95
Leukemia_promyelocytic-HL-608.45
Leukemialymphoblastic(MOLT-4)7.55
Liver18.3
Lung10.6
Lymphnode8.45
Lymphoma_burkitts(Daudi)12.8
Lymphoma_burkitts(Raji)14.15
MedullaOblongata8.7
OccipitalLobe8.9
OlfactoryBulb7.85
Ovary8.4
Pancreas9.45
PancreaticIslet10.75
ParietalLobe12.1
Pituitary11.55
Placenta9.7
Pons10.1
PrefrontalCortex10.85
Prostate10.95
Salivarygland8.5
SkeletalMuscle18.2
Skin10.8
SmoothMuscle16.95
Spinalcord10.6
SubthalamicNucleus10
SuperiorCervicalGanglion22.7
TemporalLobe9.5
Testis8.4
TestisGermCell7.65
TestisIntersitial9.3
TestisLeydigCell10.8
TestisSeminiferousTubule8.5
Thalamus10.45
Thymus7.6
Thyroid10.8
Tongue13.7
Tonsil10
Trachea8.3
TrigeminalGanglion16.2
Uterus7.2
UterusCorpus11.25
WholeBlood10.2
Wholebrain7.6
colon9.55
pineal_day11.14
pineal_night11.08
retina11.4
small_intestine8.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5416_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.01 ± 0.69
Basal Forebrain3.95 ± 0.63
Basal Part of Pons3.83 ± 0.93
Cerebellar Cortex4.92 ± 0.45
Cerebellar Nuclei3.71 ± 0.73
Claustrum3.79 ± 0.7
Epithalamus4.06 ± 0.57
Frontal Lobe3.93 ± 0.74
Globus Pallidus3.66 ± 0.96
Hypothalamus3.83 ± 0.57
Insula3.92 ± 0.49
Limbic Lobe3.78 ± 0.79
Mesencephalon4.17 ± 0.83
Myelencephalon3.99 ± 0.83
Occipital Lobe4.42 ± 0.61
Parietal Lobe4.06 ± 0.87
Pontine Tegmentum4.11 ± 0.8
Striatum3.18 ± 0.66
Subthalamus3.56 ± 0.79
Temporal Lobe3.99 ± 0.8
Thalamus4.64 ± 0.78
White Matter1.81 ± 0.84
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
ArsjCBCerebellum2.26
2.9
ArsjCTXCerebral cortex3.58
2.86
ArsjHIPHippocampal region5.4
5.14
ArsjHPFHippocampal formation4.61
4.18
ArsjHYHypothalamus0.93
0.73
ArsjLSXLateral septal complex0.91
0.94
ArsjMBMidbrain1.83
1.82
ArsjMYMedulla2.02
2.22
ArsjOLFOlfactory bulb4.48
3.36
ArsjPPons1.08
1.24
ArsjPALPallidum1.02
0.77
ArsjRHPRetrohippocampal region3.09
2.56
ArsjsAMYStriatum-like amygdalar nuclei0.48
0.49
ArsjSTRStriatum0.98
0.89
ArsjSTRdStriatum dorsal region0.93
0.96
ArsjSTRvStriatum ventral region1.49
0.94
ArsjTHThalamus6.06
4.64
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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